| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 59 (0.760) | 43/98 | 0.6 | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 1218697 = | 0 (0.000) | coding (1209/1524 nt) | ycgG | conserved inner membrane protein | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 72 (0.900) | 46/100 | 0.5 | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
CGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1218650‑1218699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < REL606/2775877‑2775830 CGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTT > 1:7022097/1‑51 GGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTG < 1:6414392/51‑1 GGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTG < 1:4352818/51‑1 GGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTG > 1:1398949/1‑51 TTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTA < 1:2465815/51‑1 TTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTA > 1:2595695/1‑51 TGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTAC > 1:1644423/1‑51 GAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACT > 1:3855067/1‑51 GAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACT < 1:6693367/51‑1 AACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTG < 1:6945338/51‑1 ACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGC > 1:2691155/1‑51 CATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCA > 1:5776307/1‑51 ATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCAC > 1:3311552/1‑51 ATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCAC > 1:1110468/1‑51 ACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCC > 1:4343297/1‑51 ACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCC < 1:6533617/51‑1 CTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCA < 1:3151303/51‑1 CTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCA < 1:1125018/51‑1 GCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATT < 1:5691147/51‑1 ATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTT < 1:2314200/51‑1 ATGAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTT < 1:3133118/51‑1 GAAAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGT > 1:2728501/1‑51 AAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTG < 1:3847365/51‑1 AAATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTG > 1:4757783/1‑51 ATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGA < 1:2752424/51‑1 ATGGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGA < 1:4420503/51‑1 GGTTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACG < 1:4966475/51‑1 TTTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGAT < 1:761475/51‑1 TTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATG < 1:267178/51‑1 TTTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATG > 1:1839694/1‑51 TTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGA > 1:4314862/1‑51 TTGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGA > 1:5636180/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:5342784/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:6319623/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:3158679/1‑51 TGTCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAA < 1:3555834/51‑1 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:1998348/1‑51 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:6443131/51‑1 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:1730111/1‑51 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:3282533/51‑1 TCATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAAT > 1:4922680/1‑51 CATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:2258440/1‑51 CATCGCGCTGAATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:2704640/1‑51 ATCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGG < 1:3905504/51‑1 TCGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:5960571/1‑51 CGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA > 1:2749237/1‑51 CGCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAA < 1:4337903/51‑1 GCGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT > 1:6978531/1‑51 CGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:1882396/51‑1 CGCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:5771769/51‑1 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:3721921/51‑1 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG > 1:3525950/1‑51 GCTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG < 1:197437/51‑1 CTGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:4972834/1‑51 aaagaGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:2130322/6‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:6850407/1‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:3351697/1‑51 TGGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:4842558/1‑51 agtacATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:4079391/6‑51 GGATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:4011812/51‑1 ATGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT < 1:5794215/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:2556381/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:4762094/51‑1 TGATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:3014990/51‑1 GATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA > 1:4884923/1‑51 ATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:5725873/1‑51 ATTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:7260961/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:1915190/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:2018219/1‑51 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:1288413/51‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:5625708/51‑1 TTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA > 1:5549721/1‑51 CGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1218650‑1218699‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < REL606/2775877‑2775830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |