| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 59 (0.760) | 43/98 | 0.6 | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 1218697 = | 0 (0.000) | coding (1209/1524 nt) | ycgG | conserved inner membrane protein | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 72 (0.900) | 46/100 | 0.5 | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/590425‑590471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTG > REL606/1218697‑1218746 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTC < 1:289676/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTC < 1:2680567/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTC < 1:584100/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTC > 1:3706607/1‑51 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCG < 1:144982/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGG > 1:945537/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTA > 1:1573531/1‑51 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTA < 1:315692/51‑1 TATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTAC < 1:5915227/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACT < 1:674365/51‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTG < 1:6829713/51‑1 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTG < 1:3093565/51‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGG < 1:4377382/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGC < 1:4162065/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCT < 1:5625711/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCT < 1:1719969/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTA < 1:5000608/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTA > 1:3973294/1‑51 GTTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCA < 1:604799/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAG < 1:3581982/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAG > 1:925366/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAG > 1:6095436/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGG > 1:1925813/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTAC < 1:869593/46‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTAC < 1:3220723/46‑1 TAACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGG < 1:6458488/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCT < 1:5597334/51‑1 TGTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTT > 1:1922945/1‑51 GTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTC < 1:5325784/51‑1 GTCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTC < 1:5343009/51‑1 TCCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCT < 1:4496538/51‑1 CCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTT > 1:4347115/1‑51 CCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTT < 1:5786824/51‑1 CCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTT > 1:6010733/1‑51 CCAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTT < 1:5459196/51‑1 CAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTA > 1:3612992/1‑51 CAACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTA < 1:2289334/51‑1 AACTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTAT > 1:5675206/1‑51 CTTTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCT < 1:1965595/51‑1 TTTTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTC < 1:5869122/51‑1 TTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCAT > 1:175498/1‑51 TTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCAT < 1:3517773/51‑1 TTGGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCAT < 1:4187306/51‑1 GGGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGA > 1:2348194/1‑51 GGGTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGAC < 1:680701/51‑1 GTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCT < 1:1110041/51‑1 GTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCT > 1:5164759/1‑51 GTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCT < 1:4992779/51‑1 GTCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCT < 1:3314992/51‑1 TCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTG < 1:2338271/51‑1 TCAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTG > 1:1346114/1‑51 CAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGC > 1:4918975/1‑51 CAGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGC < 1:7301333/51‑1 AGTACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCA < 1:4306158/51‑1 TACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATA < 1:4061802/51‑1 ACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATAT < 1:613865/51‑1 ACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATAT < 1:3509006/51‑1 ACATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATAT > 1:2109087/1‑51 CATTTCGGTACTGGCTACTCAGGGCTTTCTTTTCTTCATGAtc > 1:427036/1‑41 ATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTG < 1:2229966/51‑1 ATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTG < 1:5717650/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/590425‑590471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTG > REL606/1218697‑1218746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |