| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,218,697 | IS150 (+) +3 bp | coding (1209‑1211/1524 nt) | ycgG → | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 59 (0.760) | 43/98 | 0.6 | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | 1218697 = | 0 (0.000) | coding (1209/1524 nt) | ycgG | conserved inner membrane protein | |||||
| * | ? | REL606 | = 1218699 | 0 (0.000) | 72 (0.900) | 46/100 | 0.5 | 100% | coding (1211/1524 nt) | ycgG | conserved inner membrane protein |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
Only 100 of 145 total aligned reads displayed.
GCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATT > REL606/1218649‑1218749 | gCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGAttt > 1:6083290/1‑51 (MQ=255) cGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTt > 1:7022097‑M1/1‑50 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTc < 1:2680567‑M2/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTc < 1:289676‑M2/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTc < 1:584100‑M2/4‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTc > 1:3706607‑M2/48‑51 (MQ=255) ggTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtg > 1:1398949‑M1/1‑49 (MQ=255) ggTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtg < 1:4352818‑M1/51‑3 (MQ=255) ggTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtg < 1:6414392‑M1/51‑3 (MQ=255) ttGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgta < 1:2465815‑M1/51‑5 (MQ=255) tGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtac > 1:1644423‑M1/1‑46 (MQ=255) atatgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTa > 1:1573531‑M2/44‑51 (MQ=255) gAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtact < 1:6693367‑M1/51‑7 (MQ=255) gAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtact > 1:3855067‑M1/1‑45 (MQ=255) atgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACt < 1:674365‑M2/10‑1 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTg < 1:6829713‑M2/11‑1 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTgg < 1:4377382‑M2/12‑1 (MQ=255) cATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgca > 1:5776307‑M1/1‑42 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGc < 1:4162065‑M2/13‑1 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac > 1:3311552‑M1/1‑41 (MQ=255) aTACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcac > 1:1110468‑M1/1‑41 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa > 1:3973294‑M2/37‑51 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTa < 1:5000608‑M2/15‑1 (MQ=255) aCTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaccc < 1:6533617‑M1/51‑13 (MQ=255) aCTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaccc > 1:4343297‑M1/1‑39 (MQ=255) cTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaccca < 1:1125018‑M1/51‑14 (MQ=255) cTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcaccca < 1:3151303‑M1/51‑14 (MQ=255) tttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAg > 1:925366‑M2/32‑51 (MQ=255) aTGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccatttt < 1:2314200‑M1/51‑18 (MQ=255) aTGAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccatttt < 1:3133118‑M1/51‑18 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTAc < 1:3220723‑M2/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTAc < 1:869593‑M2/16‑1 (MQ=255) ttaactgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAgg > 1:1925813‑M2/31‑51 (MQ=255) gAAAATGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgt > 1:2728501‑M1/1‑32 (MQ=255) actgtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCt < 1:5597334‑M2/24‑1 (MQ=255) aaaTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttg < 1:3847365‑M1/51‑22 (MQ=255) aaaTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttg > 1:4757783‑M1/1‑30 (MQ=255) aTGGTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttgga < 1:2752424‑M1/51‑24 (MQ=255) gtccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTc < 1:5343009‑M2/27‑1 (MQ=255) tccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCt < 1:4496538‑M2/28‑1 (MQ=255) ggTTTTGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacg < 1:4966475‑M1/51‑26 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt > 1:6010733‑M2/23‑51 (MQ=255) ccaactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCtt < 1:5786824‑M2/29‑1 (MQ=255) ttttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgat < 1:761475‑M1/51‑28 (MQ=255) caactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTa > 1:3612992‑M2/22‑51 (MQ=255) tttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatg < 1:267178‑M1/51‑29 (MQ=255) tttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatg > 1:1839694‑M1/1‑23 (MQ=255) aactttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTAt > 1:5675206‑M2/21‑51 (MQ=255) ttGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatga > 1:5636180‑M1/1‑22 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa > 1:5342784‑M1/1‑21 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa < 1:3555834‑M1/51‑31 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa > 1:3158679‑M1/1‑21 (MQ=255) tGTCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaa > 1:6319623‑M1/1‑21 (MQ=255) ttttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTc < 1:5869122‑M2/35‑1 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat < 1:3282533‑M1/51‑33 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat > 1:1998348‑M1/1‑19 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat < 1:6443131‑M1/51‑33 (MQ=255) tCATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaat > 1:1730111‑M1/1‑19 (MQ=255) cATCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatg > 1:2258440‑M1/1‑18 (MQ=255) cATCGCGCTGAATGATTTtgtactgcacccattttgttggacgatgaaatg > 1:2704640‑M1/1‑18 (MQ=255) ttggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCAt < 1:3517773‑M2/37‑1 (MQ=255) aTCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgg < 1:3905504‑M1/51‑35 (MQ=255) tCGCGCTGGATGATTTtgtactgcacccattttgttggacgatgaaatgga > 1:5960571‑M1/1‑16 (MQ=255) ggggtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGa > 1:2348194‑M2/13‑51 (MQ=255) cgcgCTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaa < 1:4337903‑M1/51‑37 (MQ=255) gcgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaat > 1:6978531‑M1/1‑14 (MQ=255) cgcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaata < 1:1882396‑M1/51‑39 (MQ=255) gtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCt > 1:5164759‑M2/10‑51 (MQ=255) gtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCt < 1:3314992‑M2/42‑1 (MQ=255) gtcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCt < 1:1110041‑M2/42‑1 (MQ=255) gcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatag < 1:197437‑M1/51‑40 (MQ=255) gcTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatag > 1:3525950‑M1/1‑12 (MQ=255) tcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTg > 1:1346114‑M2/9‑51 (MQ=255) tcagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTg < 1:2338271‑M2/43‑1 (MQ=255) cTGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagc > 1:4972834‑M1/1‑11 (MQ=255) tGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:3351697‑M1/1‑10 (MQ=255) tGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:4842558‑M1/1‑10 (MQ=255) tGGATGATTTtgtactgcacccattttgttggacgatgaaatggaatagcc > 1:6850407‑M1/1‑10 (MQ=255) cagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGc > 1:4918975‑M2/8‑51 (MQ=255) cagtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGc < 1:7301333‑M2/44‑1 (MQ=255) agtacattttgtactgcacccattttgttggacgatgaaatggaatagccc > 1:4079391‑M1/6‑9 (MQ=255) agtacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCa < 1:4306158‑M2/45‑1 (MQ=255) tacaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCata < 1:4061802‑M2/47‑1 (MQ=255) tgatTTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:2556381‑M1/51‑46 (MQ=255) tgatTTtgtactgcacccattttgttggacgatgaaatggaatagccccta < 1:3014990‑M1/51‑46 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat < 1:613865‑M2/48‑1 (MQ=255) acaTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCatat > 1:2109087‑M2/4‑51 (MQ=255) gatTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 1:4884923‑M1/1‑5 (MQ=255) caTTTCGGTACTGGCTACTCAGGGCTTTCTTTTCTTCAtgatc > 1:427036‑M2/3‑41 (MQ=255) atTTtgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 1:5725873‑M1/1‑4 (MQ=255) aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTg < 1:5717650‑M2/50‑1 (MQ=255) aTTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTg < 1:2229966‑M2/50‑1 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:1915190‑M1/1‑3 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 1:5625708‑M1/51‑49 (MQ=255) ttttgtactgcacccattttgttggacgatgaaatggaatagcccctaata > 1:5549721‑M1/1‑3 (MQ=255) ttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAt > 1:6082868/1‑51 (MQ=255) ttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAt > 1:196115/1‑51 (MQ=255) ttCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAt > 1:5986466/1‑51 (MQ=255) tCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAtt < 1:2129329/51‑1 (MQ=255) tCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGAtt < 1:1752170/51‑1 (MQ=255) | GCGGTTGAACATACTGCATGAAAATGGTTTTGTCATCGCGCTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATT > REL606/1218649‑1218749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |