| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 929,574 | IS150 (+) +3 bp | coding (946‑948/1653 nt) | hcp ← | hydroxylamine reductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 77 (1.010) | 50/96 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 929574 = | 0 (0.000) | coding (948/1653 nt) | hcp | hydroxylamine reductase | |||||
| * | ? | REL606 | = 929576 | 0 (0.000) | 65 (0.820) | 45/100 | 0.6 | 100% | coding (946/1653 nt) | hcp | hydroxylamine reductase |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
GTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/929527‑929576‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < REL606/2775877‑2775830 GTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTT > 1:7125989/1‑51GTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTT < 1:4759079/51‑1GTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTT < 1:6234754/51‑1 CCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGT < 1:3083372/51‑1 CCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGT > 1:2289857/1‑51 CAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTA > 1:5245955/1‑51 CAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTA < 1:2365664/51‑1 ATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTG < 1:6910652/51‑1 TACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGC < 1:3105733/51‑1 ACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCA < 1:1375705/51‑1 GATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACC > 1:7227402/1‑51 GATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACC > 1:5557159/1‑51 GATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACC > 1:2499185/1‑51 GATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACC > 1:6734480/1‑51 ATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCC > 1:6500280/1‑51 TCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCA < 1:397038/51‑1 GTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATT < 1:2681960/51‑1 GTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATT > 1:654290/1‑51 CATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTT > 1:4950021/1‑51 CATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTT < 1:606768/51‑1 ATAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTG < 1:4116720/51‑1 TAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGT > 1:5282923/1‑51 TAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGT < 1:3395432/51‑1 TAAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGT < 1:6656795/51‑1 AAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTT < 1:1827403/51‑1 AAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTT < 1:4421427/51‑1 AAGCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTT > 1:4214312/1‑51 GCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGG < 1:6310741/51‑1 GCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGG > 1:1531737/1‑51 GCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGG < 1:3764822/51‑1 GCGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGG < 1:13237/51‑1 CGCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGA < 1:360225/51‑1 GCCTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGAC < 1:7236225/51‑1 CTACGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGA < 1:5203278/51‑1 CGGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGA > 1:1416912/1‑51 GGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:6972089/1‑51 GGTTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAA > 1:5013767/1‑51 TTGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAAT < 1:4382318/51‑1 TGGGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATG > 1:6550231/1‑51 GGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:970089/1‑51 GGTCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGA > 1:7038573/1‑51 TCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:5263648/51‑1 TCGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT < 1:3734914/51‑1 CGATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA < 1:4679461/51‑1 ATGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC > 1:5253863/1‑51 TGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:462851/1‑51 TGATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC > 1:5285191/1‑51 GATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC < 1:1401569/51‑1 GATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC > 1:6349319/1‑51 ATGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCC < 1:2095519/51‑1 TGCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT > 1:6287252/1‑51 GCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:4560897/51‑1 GCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 1:4123191/1‑51 GCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA > 1:5865109/1‑51 GCAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTA < 1:367907/51‑1 CAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:6099884/51‑1 CAGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA < 1:1639203/51‑1 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:2624952/51‑1 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:2781490/51‑1 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:7125489/1‑51 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:2076392/51‑1 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT > 1:721324/1‑51 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:322177/51‑1 AGTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT < 1:3682308/51‑1 GTTTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < 1:4645727/51‑1 GTCCAGATACGATCGTCATAAGCGCCTACGGTTGGGTCGATGATGCAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/929527‑929576‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA < REL606/2775877‑2775830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |