| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 929,574 | IS150 (+) +3 bp | coding (946‑948/1653 nt) | hcp ← | hydroxylamine reductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 666130 | NA (NA) | 77 (1.010) | 50/96 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 929574 = | 0 (0.000) | coding (948/1653 nt) | hcp | hydroxylamine reductase | |||||
| * | ? | REL606 | = 929576 | 0 (0.000) | 65 (0.820) | 45/100 | 0.6 | 100% | coding (946/1653 nt) | hcp | hydroxylamine reductase |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666082‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCT > REL606/929574‑929623 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGT < 1:3951962/51‑1AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGT < 1:697430/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTa < 1:2272840/51‑2 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTT < 1:5196348/51‑1 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTT > 1:740593/1‑51 GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTT < 1:1180387/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTC < 1:5563828/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTC < 1:1265372/51‑1 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCG > 1:2772029/1‑51 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCG < 1:3624546/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGA < 1:3243402/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGA > 1:6389685/1‑51 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGA > 1:5764216/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAG > 1:1821467/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAG < 1:3116394/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTC < 1:4782569/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTC > 1:5103565/1‑51 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTC > 1:5654051/1‑51 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCA > 1:3548268/1‑51 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCA > 1:888865/1‑51 TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCA < 1:250822/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATC < 1:62050/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCA < 1:2606422/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCA > 1:2564145/1‑51 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCA < 1:2635198/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCA > 1:5750520/1‑51 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCAC < 1:6564919/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCAC < 1:6592837/51‑1 CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACG > 1:3883298/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGA < 1:4866626/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGAT > 1:2234362/1‑51 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATG < 1:844560/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATG < 1:6935996/51‑1 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATG > 1:367530/1‑51 GTTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATG > 1:2754867/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTATAGTTCGAGGTCATCACGATGG > 1:5868659/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGG > 1:3687671/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGG < 1:4191177/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACG < 1:1253361/46‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACG < 1:5174614/46‑1 TAACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGG < 1:2771919/51‑1 AACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGC < 1:2796491/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCC > 1:7091118/1‑51 ACTGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCC > 1:2500087/1‑51 TGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAG < 1:934418/51‑1 TGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAG < 1:4318198/51‑1 TGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAG > 1:813145/1‑51 TGTCCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAG > 1:787087/1‑51 CCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGA < 1:6191947/51‑1 CCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGA < 1:703693/51‑1 CCAACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGA < 1:4622690/51‑1 ACTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAAC < 1:2217107/51‑1 CTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACG > 1:6627211/1‑51 CTTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACG < 1:6422160/51‑1 TTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGA > 1:6207261/1‑51 TTTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGA > 1:1824513/1‑51 TTTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAG < 1:4664185/51‑1 TTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGC < 1:6425985/51‑1 TTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGC < 1:1563267/51‑1 TTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGC < 1:3944789/51‑1 TTTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGC < 1:6855647/51‑1 TTGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCG > 1:5141550/1‑51 TGGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGA > 1:4319564/1‑51 GGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAA > 1:4958556/1‑51 GGGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAA < 1:5524223/51‑1 GGGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAAC > 1:6104423/1‑51 GGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACT > 1:2617218/1‑51 GGTCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACT < 1:3639759/51‑1 TCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCC > 1:4351299/1‑51 TCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCC > 1:6938184/1‑51 TCAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACT > 1:1203487/1‑49 CAGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCA > 1:2924079/1‑51 AGTACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCAC > 1:3990362/1‑51 TACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTT < 1:682656/51‑1 TACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTT < 1:6786162/51‑1 TACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTT < 1:4666046/51‑1 TACAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTT > 1:1741907/1‑51 CAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGC < 1:3514627/51‑1 CAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGC < 1:5025519/51‑1 CAGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGC > 1:241681/1‑51 AGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCT < 1:307903/51‑1 AGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCT > 1:5157879/1‑51 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666082‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caGTTCGAGGTCATCACGATGGGGCCAGGGAAACGAGCGAACTCCACTTGCT > REL606/929574‑929623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |