| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 63 (0.790) | 46/100 | 0.5 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1354425 = | 0 (0.000) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
| * | ? | REL606 | = 666130 | NA (NA) | 79 (1.010) | 52/98 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1354427 | 0 (0.000) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664733‑664688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCA > REL606/1354425‑1354472 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTC < 1:532359/51‑1TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTC > 1:1779611/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCA > 1:3891420/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCA > 1:7228271/1‑51 TAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCA > 1:3464636/1‑51 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCAT > 1:3153340/1‑51 GGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATA < 1:6390739/51‑1 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAG > 1:2060473/1‑51 GGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAG < 1:370404/51‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGG < 1:222269/51‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGG < 1:2492327/51‑1 GGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGG < 1:4955647/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGC < 1:533851/51‑1 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGC > 1:5044745/1‑51 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGC < 1:3054948/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCC < 1:3573756/51‑1 CTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCC < 1:6939795/51‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCC > 1:6611351/1‑51 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCA < 1:6477059/51‑1 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCA < 1:5828507/51‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACG > 1:965538/1‑51 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACG > 1:529053/1‑51 CCATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGA > 1:943380/1‑51 ATTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAG > 1:1125002/1‑50 TTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGC > 1:5943965/1‑51 TTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGC < 1:1891893/51‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGC > 1:6445001/1‑51 TTCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCG < 1:2919674/51‑1 TCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGC < 1:5608448/51‑1 TCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGC < 1:615595/51‑1 TCATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGC > 1:3280954/1‑51 ATCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGC < 1:3644689/51‑1 TCGTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCG < 1:1755977/51‑1 GTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGT > 1:5171413/1‑51 GTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGT > 1:6354751/1‑51 GTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGT < 1:1737640/51‑1 GTCCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGG > 1:3876710/1‑50 CCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAA < 1:4231574/51‑1 CCAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAA > 1:2969226/1‑51 CAACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAA < 1:6897361/51‑1 AACAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAA > 1:3408061/1‑51 CAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATA > 1:2611600/1‑51 CAAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATA < 1:7148003/51‑1 AAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAG > 1:19883/1‑51 AAAATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAG < 1:5126857/51‑1 ATGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGG < 1:1944028/51‑1 TGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGC > 1:6578516/1‑51 TGGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGC < 1:4635656/51‑1 GGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCC < 1:5448745/51‑1 GGGTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCC < 1:1774255/51‑1 GTGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGC > 1:7048144/1‑51 TGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCC > 1:5506528/1‑51 TGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCC < 1:2908925/51‑1 TGCAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCC > 1:1854012/1‑51 CAGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGT > 1:7233454/1‑51 AGTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTT > 1:1297717/1‑51 GTACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTT < 1:1506697/51‑1 TACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTC > 1:5984146/1‑51 TACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTC > 1:6880532/1‑51 TACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTC < 1:1903248/51‑1 TACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTC > 1:2476503/1‑51 ACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCA < 1:191482/51‑1 ACATTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCA < 1:5609739/51‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/664733‑664688‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCA > REL606/1354425‑1354472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |