| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 63 (0.790) | 46/100 | 0.5 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1354425 = | 0 (0.000) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
| * | ? | REL606 | = 666130 | NA (NA) | 79 (1.010) | 52/98 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1354427 | 0 (0.000) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
Only 100 of 148 total aligned reads displayed.
AACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCC > REL606/1354377‑1354475 | aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTg < 1:1452841/51‑1 (MQ=255)aaCTGTTCGCGCGATTTCGCCGGATTGTATTCAGCAATTTTAGCCTCGTTg > 1:2268984/1‑51 (MQ=255) aCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGt < 1:1728759‑M2/51‑2 (MQ=255) aCTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGt > 1:4701506‑M2/1‑50 (MQ=255) ttaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTc < 1:532359‑M2/5‑1 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:3891420‑M2/46‑51 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:3464636‑M2/46‑51 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCa > 1:7228271‑M2/46‑51 (MQ=255) tGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgt > 1:860659‑M2/1‑48 (MQ=255) tGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgt > 1:6165752‑M2/1‑48 (MQ=255) gTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgta > 1:4396705‑M2/1‑47 (MQ=255) gTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgta > 1:5011888‑M2/1‑47 (MQ=255) gTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgta > 1:1233688‑M2/1‑47 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCAt > 1:3153340‑M2/45‑51 (MQ=255) ttCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtac < 1:5634222‑M2/51‑6 (MQ=255) ttCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtac > 1:703404‑M2/1‑46 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATa < 1:6390739‑M2/8‑1 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAg > 1:2060473‑M2/43‑51 (MQ=255) gggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAg < 1:370404‑M2/9‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAgg < 1:222269‑M2/10‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAgg < 1:2492327‑M2/10‑1 (MQ=255) ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAgg < 1:4955647‑M2/10‑1 (MQ=255) cgcgcgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactg < 1:3166403‑M2/51‑8 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc < 1:3054948‑M2/11‑1 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc > 1:5044745‑M2/41‑51 (MQ=255) gctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGc < 1:533851‑M2/11‑1 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGcc < 1:6939795‑M2/12‑1 (MQ=255) tattccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGccc > 1:6611351‑M2/39‑51 (MQ=255) cgATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccc < 1:5090445‑M2/51‑12 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:5828507‑M2/14‑1 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCa < 1:6477059‑M2/14‑1 (MQ=255) tccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACg > 1:965538‑M2/36‑51 (MQ=255) ccatttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGa > 1:943380‑M2/35‑51 (MQ=255) ttCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaa < 1:515876‑M2/51‑16 (MQ=255) tCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaa < 1:3010713‑M2/51‑17 (MQ=255) atttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAg > 1:1125002‑M2/33‑50 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc < 1:1891893‑M2/20‑1 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc > 1:5943965‑M2/32‑51 (MQ=255) tttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgc > 1:6445001‑M2/32‑51 (MQ=255) cGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaa < 1:2305261‑M2/51‑18 (MQ=255) cGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaa > 1:5069687‑M2/1‑34 (MQ=255) ttcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcg < 1:2919674‑M2/21‑1 (MQ=255) tcatcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcgc > 1:3280954‑M2/30‑51 (MQ=255) ccGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagt < 1:2364559‑M2/51‑20 (MQ=255) cGGATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagtt < 1:6322471‑M2/51‑21 (MQ=255) atcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGgcgcgc < 1:3644689‑M2/24‑1 (MQ=255) tcgtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGcgcgcg < 1:1755977‑M2/25‑1 (MQ=255) gATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttgg < 1:417518‑M2/51‑23 (MQ=255) gATTGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttgg < 1:1132170‑M2/51‑23 (MQ=255) ttGTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggac > 1:3999172‑M2/1‑27 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCgg > 1:3876710‑M2/25‑50 (MQ=255) gtccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGt > 1:5171413‑M2/25‑51 (MQ=255) gTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacag < 1:6016952‑M2/51‑27 (MQ=255) gTATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacag < 1:921603‑M2/51‑27 (MQ=255) ccaacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaa < 1:4231574‑M2/29‑1 (MQ=255) tATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagt > 1:5993365‑M2/1‑24 (MQ=255) tATTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagt < 1:3310550‑M2/51‑28 (MQ=255) caacaaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTaaa < 1:6897361‑M2/30‑1 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:1099345‑M2/51‑29 (MQ=255) aTTCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtt < 1:3249429‑M2/51‑29 (MQ=255) ttCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagtta < 1:6219388‑M2/51‑30 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:6497282‑M2/51‑31 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:2138776‑M2/51‑31 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa > 1:6202025‑M2/1‑21 (MQ=255) tCAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaa < 1:550877‑M2/51‑31 (MQ=255) caaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATa < 1:7148003‑M2/33‑1 (MQ=255) cAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaa < 1:6349056‑M2/51‑32 (MQ=255) cAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaa < 1:7100258‑M2/51‑32 (MQ=255) cAGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaa > 1:3486539‑M2/1‑20 (MQ=255) aaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATag > 1:19883‑M2/18‑51 (MQ=255) aaaatgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATag < 1:5126857‑M2/34‑1 (MQ=255) aGTAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaac > 1:4115952‑M2/1‑19 (MQ=255) tAATTTTAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacac > 1:2591584‑M2/1‑17 (MQ=255) atgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAgg < 1:1944028‑M2/37‑1 (MQ=255) tgggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgc > 1:6578516‑M2/14‑51 (MQ=255) gggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgcc < 1:5448745‑M2/39‑1 (MQ=255) gggtgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgcc < 1:1774255‑M2/39‑1 (MQ=255) ttttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgag < 1:2668498‑M2/51‑38 (MQ=255) ttttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgag < 1:2846653‑M2/51‑38 (MQ=255) tttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgagg < 1:4679515‑M2/51‑39 (MQ=255) tttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgagg > 1:3290306‑M2/1‑13 (MQ=255) tttAGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgagg < 1:6791336‑M2/51‑39 (MQ=255) tgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgcc > 1:5506528‑M2/10‑51 (MQ=255) tgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgcc > 1:1854012‑M2/10‑51 (MQ=255) tgcagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGgccgcc < 1:2908925‑M2/42‑1 (MQ=255) cagtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGt > 1:7233454‑M2/8‑51 (MQ=255) aGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:2578206‑M2/51‑42 (MQ=255) aGCCTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcat < 1:7038956‑M2/51‑42 (MQ=255) agtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGtt > 1:1297717‑M2/7‑51 (MQ=255) gtacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGttt < 1:1506697‑M2/46‑1 (MQ=255) ccTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatat < 1:6696782‑M2/51‑44 (MQ=255) tacaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTc > 1:2476503‑M2/5‑51 (MQ=255) cTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatata < 1:2515187‑M2/51‑45 (MQ=255) cTCGTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 1:5445728‑M2/1‑7 (MQ=255) acaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCa < 1:5609739‑M2/48‑1 (MQ=255) acaTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCa < 1:191482‑M2/48‑1 (MQ=255) gTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:4539894‑M2/1‑4 (MQ=255) gTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt < 1:2411840‑M2/51‑48 (MQ=255) gTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:4407913‑M2/1‑4 (MQ=255) gTTGtgtactgaccccaaaaagttggacagttaaacacgaggcatataggt > 1:1651870‑M2/1‑4 (MQ=255) | AACTGTTCGCGCGATTTCGCCGGATTGTATTCAGTAATTTTAGCCTCGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCC > REL606/1354377‑1354475 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |