| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,354,425 | IS150 (–) +3 bp | coding (1053‑1055/1644 nt) | sapA ← | predicted antimicrobial peptide transporter subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 664688 = | NA (NA) | 63 (0.790) | 46/100 | 0.5 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 1354425 = | 0 (0.000) | coding (1055/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
| * | ? | REL606 | = 666130 | NA (NA) | 79 (1.010) | 52/98 | 0.2 | 100% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 1354427 | 0 (0.000) | coding (1053/1644 nt) | sapA | predicted antimicrobial peptide transporter subunit | |||||
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666084‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGT < REL606/1354427‑1354378 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC > 1:4407913/1‑51ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC < 1:4140035/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC < 1:2411840/51‑1ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC > 1:4539894/1‑51ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAAC > 1:1651870/1‑51 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACG < 1:6458604/51‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGA > 1:1620682/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAG > 1:5445728/1‑51 TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAG < 1:2515187/51‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGG < 1:6696782/51‑1 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGG < 1:1968798/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCT < 1:7038956/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCT < 1:7033936/51‑1 ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCT < 1:2578206/51‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAA < 1:631553/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAA > 1:3290306/1‑51 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAA < 1:4679515/51‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAA < 1:6791336/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAA < 1:223872/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAA < 1:2846653/51‑1 CTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAA < 1:2668498/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAAT < 1:5021534/51‑1 TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAAT < 1:3989349/51‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTA > 1:2591584/1‑51 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTA < 1:3286350/51‑1 TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTAC > 1:4316757/1‑51 GTTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACT > 1:4115952/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTG > 1:3486539/1‑51 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTG < 1:7100258/51‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTG < 1:6349056/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGA > 1:971068/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGA < 1:6497282/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGA < 1:2138776/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGA < 1:550877/51‑1 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGA > 1:6202025/1‑51 TTAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATT < 1:321750/46‑1 TAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAA < 1:6219388/51‑1 TAACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAA > 1:4774294/1‑51 AACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAAT > 1:568232/1‑51 AACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAAT < 1:1099345/51‑1 AACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAAT < 1:3249429/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATA < 1:3310550/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATA < 1:2423144/51‑1 ACTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATA > 1:5993365/1‑51 CTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATAC > 1:2093894/1‑51 CTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATAC < 1:6016952/51‑1 CTGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATAC < 1:921603/51‑1 TGTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACA < 1:3092115/51‑1 GTCCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAA > 1:3999172/1‑51 CCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATC < 1:417518/51‑1 CCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATC < 1:3804068/51‑1 CCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATC < 1:1132170/51‑1 CCAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAAT < 1:6627992/50‑1 CAACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCC < 1:718367/51‑1 AACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCG < 1:6322471/51‑1 AACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCG < 1:757958/51‑1 ACTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGG < 1:2364559/51‑1 CTTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGC < 1:5071475/51‑1 TTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCG > 1:5069687/1‑51 TTTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCG < 1:2305261/51‑1 TTTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGA < 1:3010713/51‑1 TTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA < 1:514344/51‑1 TTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA < 1:515876/51‑1 TTTGGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAA < 1:1144791/51‑1 GGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATC < 1:2494331/51‑1 GGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATC < 1:5449467/51‑1 GGGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATC < 1:2856569/51‑1 GGGTCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCG < 1:5090445/51‑1 TCAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGC > 1:6547449/1‑51 CAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCG > 1:2321664/1‑51 CAGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCG < 1:3166403/51‑1 AGTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGA < 1:92199/51‑1 GTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAA < 1:5634222/51‑1 GTACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAA > 1:703404/1‑51 TACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC > 1:4396705/1‑51 TACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC > 1:5011888/1‑51 TACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAAC > 1:1233688/1‑51 ACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACA > 1:6165752/1‑51 ACACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACA > 1:860659/1‑51 ACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGT > 1:4701506/1‑51 ACAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGT < 1:1728759/51‑1 ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/666084‑666130‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCAACGAGGCTAAAATTACTGAATACAATCCGGCGAAATCGCGCGAACAGT < REL606/1354427‑1354378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |