| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | REL606 | 3,482,398 | Δ25 bp | 100% | coding (714‑738/2706 nt) | malT → | transcriptional regulator MalT |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3482398 | 3482422 | 25 | 21 [0] | [0] 21 | malT | transcriptional regulator MalT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3482397 | 0 (0.000) | 20 (0.750) | 14/278 | NT | 100% | coding (713/2706 nt) | malT | transcriptional regulator MalT |
| ? | REL606 | 3482423 = | 0 (0.000) | coding (739/2706 nt) | malT | transcriptional regulator MalT | |||||
CAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATC > REL606/3482249‑3482539 | ccgtatgcgtatcagttttttgattGCCGTCTGTCATCGCCGATTGAAGCCCCACCAAGCATTCGGATTTGCGATTACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAa < 1:207717‑M1/138‑2 (MQ=255) gTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgat > 2:533485‑M1/1‑117 (MQ=255) tCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgagg < 2:533905‑M1/150‑38 (MQ=255) ccgaataatgcagtcggatTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgt < 1:442634‑M1/141‑51 (MQ=255) gCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcg > 2:52258‑M1/1‑98 (MQ=255) gAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatc < 2:158779‑M1/150‑56 (MQ=255) ttCCGCTTGGACGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaa < 1:3458‑M1/150‑82 (MQ=255) cGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaacgcgccattttgcg > 1:124795‑M1/1‑55 (MQ=255) cGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcg > 2:49028‑M1/1‑55 (MQ=255) cTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacg < 2:673711‑M1/150‑107 (MQ=255) gCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcac < 2:326114‑M1/150‑113 (MQ=255) tataagagacagtacccactcagccCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacc < 1:99753‑M1/138‑121 (MQ=255) cGCCCGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcgtattagctggtcaatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacc < 1:48880‑M1/150‑121 (MQ=255) cGCCCGGCAGAATAACCACGCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatcaacgatgcactcatcacc < 1:402613‑M1/150‑121 (MQ=255) cGGCAGAATACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacccgtg > 2:446604‑M1/1‑26 (MQ=255) tACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcaccctgtctcttata > 2:100049‑M1/1‑18 (MQ=255) tACCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacccgtgtgaccggc > 2:478379‑M1/1‑18 (MQ=255) aCCCACTCAGCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacccgtgtgaccggcg > 1:393924‑M1/1‑17 (MQ=255) gCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacccgtgtgaccggcgaagaaaacg > 1:66144‑M1/1‑8 (MQ=255) gCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacccgtgtgaccggcgaagaaaacg > 2:135562‑M1/1‑8 (MQ=255) gCCCATAAaatgccagccatctttcggattatctggtcgatgaggttttggataacgtcgatctcgcaacgcgccattttctgttgaaaagcgccattttgcgctcaatgaacgatgcactcatcacccgtgtgaccggcgaagaaaacg > 2:103872‑M1/1‑8 (MQ=255) | CAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATC > REL606/3482249‑3482539 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |