| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | REL606 | 3,482,398 | Δ25 bp | 100% | coding (714‑738/2706 nt) | malT → | transcriptional regulator MalT |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3482398 | 3482422 | 25 | 21 [0] | [0] 21 | malT | transcriptional regulator MalT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3482397 | 0 (0.000) | 20 (0.750) | 14/278 | NT | 100% | coding (713/2706 nt) | malT | transcriptional regulator MalT |
| ? | REL606 | 3482423 = | 0 (0.000) | coding (739/2706 nt) | malT | transcriptional regulator MalT | |||||
CAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3482249‑3482397‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > REL606/3482423‑3482564 ccgtatgcgtatCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCCCACCAAGCATTCGGATTTGCGATTACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAA < 1:207717/138‑1 GTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGAT > 2:533485/1‑150 TCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGG < 2:533905/150‑1 ccgaataatGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGT < 1:442634/141‑1 GCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCG > 2:52258/1‑150 GAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATC < 2:158779/150‑1 TTCCGCTTGGACGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAA < 1:3458/150‑1 CGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAACGCGCCATTTTGCG > 1:124795/1‑150 CGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCG > 2:49028/1‑150 CTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACG < 2:673711/150‑1 GCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCAC < 2:326114/150‑1 tataagagacagTACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACC < 1:99753/138‑1 CGCCCGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGTATTAGCTGGTCAATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACC < 1:48880/150‑1 CGCCCGGCAGAATAACCACGCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATCAACGATGCACTCATCACC < 1:402613/150‑1 CGGCAGAATACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTG > 2:446604/1‑150 TACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCtgtctcttata > 2:100049/1‑139 TACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGC > 2:478379/1‑150 ACCCACTCAGCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCG > 1:393924/1‑150 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > 1:66144/1‑150 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > 2:135562/1‑150 GCCCATAAAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > 2:103872/1‑150 CAGGAAGCGAAGCAGTTTTTTGATTGCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3482249‑3482397‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > REL606/3482423‑3482564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |