| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | REL606 | 3,482,398 | Δ25 bp | 100% | coding (714‑738/2706 nt) | malT → | transcriptional regulator MalT |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3482398 | 3482422 | 25 | 21 [0] | [0] 21 | malT | transcriptional regulator MalT |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3482397 | 0 (0.000) | 20 (0.750) | 14/278 | NT | 100% | coding (713/2706 nt) | malT | transcriptional regulator MalT |
| ? | REL606 | 3482423 = | 0 (0.000) | coding (739/2706 nt) | malT | transcriptional regulator MalT | |||||
GCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > REL606/3482274‑3482564 | ccgtatgcgtatcagttttttgattgccgtctgtcatcgccgattgaagccccaccaagcattcggatttgcgattacgtttccggttgggcgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaa < 1:207717‑M2/1‑1 (MQ=255) gtcatcgccgattgaagccgcagaaagcagtcggatttgcgatgacgtttccggttgggcgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGAt > 2:533485‑M2/118‑150 (MQ=255) tcgccgattgaagccgcagaaagcagtcggatttgcgatgacgtttccggttgggcgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAgg < 2:533905‑M2/37‑1 (MQ=255) ccgaataatgcagtcggatttgcgatgacgtttccggttgggcgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGt < 1:442634‑M2/50‑1 (MQ=255) gcagaaagcagtcggatttgcgatgacgtttccggttgggcgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCg > 2:52258‑M2/99‑150 (MQ=255) gaaagcagtcggatttgcgatgacgtttccggttgggcgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGAtc < 2:158779‑M2/55‑1 (MQ=255) ttccgcttggacgacggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGaaa < 1:3458‑M2/81‑1 (MQ=255) cggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAACGCGCCATTTTgcg > 1:124795‑M2/56‑150 (MQ=255) cggcactacagctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTgcg > 2:49028‑M2/56‑150 (MQ=255) ctaatcgccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACg < 2:673711‑M2/106‑1 (MQ=255) gccctctccgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCAc < 2:326114‑M2/112‑1 (MQ=255) tataagagacagtacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCAcc < 1:99753‑M2/120‑1 (MQ=255) cgcccggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGTATTAGCTGGTCAATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCAcc < 1:48880‑M2/120‑1 (MQ=255) cgcccggcagaataaccacgcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATCAACGATGCACTCATCAcc < 1:402613‑M2/120‑1 (MQ=255) cggcagaatacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCgtg > 2:446604‑M2/27‑150 (MQ=255) tacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGAtgcactcatcaccctgtctcttata > 2:100049‑M2/19‑139 (MQ=255) tacccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGc > 2:478379‑M2/19‑150 (MQ=255) acccactcagcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCg > 1:393924‑M2/18‑150 (MQ=255) gcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACg > 1:66144‑M2/9‑150 (MQ=255) gcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACg > 2:135562‑M2/9‑150 (MQ=255) gcccataaAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACg > 2:103872‑M2/9‑150 (MQ=255) | GCCGTCTGTCATCGCCGATTGAAGCCGCAGAAAGCAGTCGGATTTGCGATGACGTTTCCGGTTGGGCGACGGCACTACAGCTAATCGCCCTCTCCGCCCGGCAGAATACCCACTCAGCCCATAAGTCGGCACGCCGCCTGGCGGGAATCAATGCCAGCCATCTTTCGGATTATCTGGTCGATGAGGTTTTGGATAACGTCGATCTCGCAACGCGCCATTTTCTGTTGAAAAGCGCCATTTTGCGCTCAATGAACGATGCACTCATCACCCGTGTGACCGGCGAAGAAAACG > REL606/3482274‑3482564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |