BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	REL606	3882311 =	61 (1.300)	6 (0.130)	4/60	5.3	coding (107/816 nt)	atpB	F0F1 ATP synthase subunit A
*	?	REL606	4418297 =	53 (0.970)	6 (0.130)	4/60	5.3	coding (728/861 nt)	ytfG	NAD(P)H:quinone oxidoreductase
Rejected: Position hash score below cutoff.


CGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCAGGCAGGCCAACGCTTTT  >  REL606/4418262‑4418331


cGCCTTTCAATCCGCCAACGTCAGAATCCGCCAGCa                                    <  1:3447350/36‑1 (MQ=25)


 gCCTTTCAATGCGCCAACGTCAGAATCCGCCAGCat                                   <  1:4940137/36‑1 (MQ=255)


  catttCGATGCGCCAACGTCAGAATCCGCCAACata                                  <  1:7363869/34‑1 (MQ=37)


   cTTTCGATGCGCCAACGTCAGAATCCGCCAGCatat                                 >  1:287820/1‑36 (MQ=255)


    tttCGATGCGCCAACGTCAGAATCCGCCAGCATATc                                <  1:2167763/36‑1 (MQ=255)


    tttCGATGCGCCAACGTCAGAATCCGCCAGCACATc                                >  1:5009538/1‑36 (MQ=255)


    ttgcGATGCGCAAAACTCAGAATCCGCCAGCCTATc                                >  1:6224338/4‑36 (MQ=12)


     ttCGATGCGCCAACGTCAGAATCCGCCAGCATTTcc                               >  1:5023531/1‑36 (MQ=255)


     ttCGATGCGCCAACGTCAGAATCCGCCAGCATATcc                               >  1:1912487/1‑36 (MQ=255)


      tCGATGCGCCAACGTCAGAATCCGCCAGCATATCCg                              >  1:3523397/1‑36 (MQ=255)


         aTGCGCCAACGTCAGAATCCGCCAGCATATCCGCCa                           <  1:6968529/36‑1 (MQ=255)


         aTGCGCCAACGTCAGAATCCGCCAGCATATCCGCCa                           >  1:5461820/1‑36 (MQ=255)


         aTGCGCCAACGTCAGAATCCGCCAGCATATCCGCCa                           >  1:224742/1‑36 (MQ=255)


            cgcCAACGTCAGAATCCGCCAGCATATCCGCCAGTc                        >  1:4455293/1‑36 (MQ=255)


            cgcCAACGTCAGAATCCGCCAGCATATCCGCCAGTc                        >  1:4145204/1‑36 (MQ=255)


            ccccAACGTCACAATCCGCCAGCATATCCGCCAGTc                        <  1:2920167/34‑1 (MQ=25)


             gcCAACGTCAGAATCCGCCAGCATATCCGCCAGTcc                       >  1:2289748/1‑36 (MQ=255)


              ccAACGCCAGAACCCGCCAGCATATCCGCCAGTCCg                      <  1:6993649/36‑1 (MQ=25)


              caaaCATCAGAACCCGCCAGCATATCCGCCAGTCCg                      <  1:3982266/34‑1 (MQ=21)


               aaccGTCAGAAGCCGCCAGCATATCCGCCAGTCCGt                     <  1:3235610/33‑1 (MQ=21)


                accGTCAAAATCCGCCAGCATATCCGCCAGTCCGTc                    <  1:2046949/34‑1 (MQ=25)


                aaCGTCAGAATCCGCCAGCATATCCGCCAGTCCgcc                    >  1:2225661/1‑34 (MQ=255)


                aaCGTCAGAATCCGCCAGCATATCCGCCAGTCCGTc                    >  1:5508874/1‑36 (MQ=255)


                 aCGTCAGAATCCGCCAGCATATCCGCCAGTCCGTca                   >  1:4169729/1‑36 (MQ=255)


                 aCGTCAGAATCCGCCAACATATCCGCCAGTCCGTca                   <  1:6469376/36‑1 (MQ=255)


                  cGTCAGAATCCGCCAGCATATCCGCCAGTCCGTcag                  >  1:3810974/1‑36 (MQ=255)


                  cGTAAGAACCCGCCAGCATATCCGCCAGTCCGTcag                  <  1:3844568/36‑1 (MQ=25)


                    tCAGAATCCGCCAGCATATCCGCCAGTCCGTcagcc                >  1:2084900/1‑34 (MQ=255)


                    tCAAAACCCGCCAGCATATCCGCCAGTCCGTcaggc                <  1:2152858/36‑1 (MQ=25)


                     cAGAATCCGCCAGCATATCCGCCAGTCCGTcaggca               >  1:5529612/1‑36 (MQ=255)


                     cAGAACCCGCCAGCATATCCGCCAGTCCGTcaggca               <  1:5403716/36‑1 (MQ=255)


                     cAGAACCCGCCAGCATATCCGCCAGTCCGTcaggca               <  1:1604285/36‑1 (MQ=255)


                      aGAATCCGCCAGCATATCCGCCAGTCCGTcagccag              >  1:4706039/1‑36 (MQ=255)


                       gAACCCGCCAGCATATCCGCCAGTCCGAcaggcagg             <  1:2600657/36‑1 (MQ=25)


                        aaTCCGCCAGCATATCCGCCAGTCAGTCaggcaggc            >  1:6972084/1‑36 (MQ=255)


                         aaccGCCAGCATATCCGCCAGTCCGTCAGGCAGGcc           <  1:2022085/34‑1 (MQ=255)


                          tCCGCCAGCCTATCCGCCAGTCCGTCAGCCCGGccc          >  1:4256762/1‑35 (MQ=21)


                           ccaccAGCATATCCGCCACTCCGTCAGGCACGCCaa         >  1:4394249/4‑36 (MQ=18)


                           ccGCCAGCATATCCGCCAGTCCGTCAGGCAGGGCaa         >  1:3860012/1‑36 (MQ=255)


                           ccGCCAGAATATCCGCCAGTCCGTCAGGCAGGCCaa         <  1:4598736/36‑1 (MQ=255)


                            cGCCAGCATATCCGCCAGTCCGTCAGGCAGGCCAAc        >  1:1389921/1‑36 (MQ=255)


                             gCCAGCATATCCGCCAGTCCGTCAGGCAGGCCAACg       >  1:5839194/1‑36 (MQ=255)


                              ccAGCATATCCGCCAGTCCGTCAGGCAGGCCAACGc      >  1:6542421/1‑36 (MQ=255)


                              ccAGCATATCCGCCAGTCCGCCAGGCAGGCCAACGc      >  1:6247414/1‑36 (MQ=255)


                               cAGCATATCCGCCAGTCCGTCAGGCAGGCCAACGCt     >  1:2137620/1‑36 (MQ=255)


                               cAGCATATCCGCCAGTCCGTCAGGCAGGCCAACGCt     >  1:4482259/1‑36 (MQ=255)


                               cAGCAAACCCGCCAGCCCGTCAGGCAGGCCAACGCt     <  1:5872311/36‑1 (MQ=18)


                                aGCATATCCGCCAGTCCGTCAGGCAGGCCAACGCtt    >  1:185906/1‑36 (MQ=255)


                                aGCATATCCGCCAGTCCGTCAGGCAGGCCAACGCtt    <  1:104499/36‑1 (MQ=255)


                                aGCATATCCGCCAGTCCGCCAGGCAGCCCAACGCtt    >  1:5473879/1‑36 (MQ=25)


                                 gCATATCCGCCAGTCCGTCAGGCAGGCCACCGCttt   >  1:4390052/1‑36 (MQ=255)


                                 gCATATCCGCCAGTCCGTCAGGCAGGCCAACGCttt   <  1:7297822/36‑1 (MQ=255)


                                 acATATCCGCCAGTCCGTCAGGCAGGCCAACGCttt   <  1:7194527/35‑1 (MQ=255)


                                  cATACCCGCCAGTCCGTCAGGCAGGCCAACGCtttt  <  1:2713557/36‑1 (MQ=255)


CGCCTTTCGATGCGCCAACGTCAGAATCCGCCAGCATATCCGCCAGTCCGTCAGGCAGGCCAACGCTTTT  >  REL606/4418262‑4418331

Base quality scores:


ATCG

< 3 ≤


ATCG

< 5 ≤


ATCG

< 13 ≤


ATCG

< 27 ≤


ATCG

< 32 ≤


ATCG