New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	REL606	= 3417473	65 (1.540)	12 (0.280)	6/54	3.9	coding (613/1221 nt)	argD	bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase
	?	REL606	= 4222576	45 (0.820)				coding (1432/1545 nt)	malF	maltose transporter subunit
Rejected: Position hash score below cutoff.

CTGCCGCCAGACCGAAGTCCTGACCCCCGCCGCCTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAGCA  >  REL606/4222543‑4222611                                  |                                    ctgcCGCCAGACCGAAGTCCTGACCCCCGCCGCCtt                                   <  1:697232/36‑1 (MQ=255) ctgcCGCCAGACCGAAGTCCTGACCCCCGCCGCCtt                                   >  1:5636813/1‑36 (MQ=255) ctgcCGCCAGACCGAAGCCCGGACCCCCGCCCCCtc                                   >  1:5584886/1‑35 (MQ=21)   gccgccAGACCGAAGTCCTGACCCCCGCAGCCTTCa                                 >  1:7082951/1‑36 (MQ=255)     cgccAGACCGAAGTCCTGACCCCCGCCGCCTTCaaa                               >  1:3965294/1‑36 (MQ=255)      gccAGACCGAAGTCCTGACCCCCGCCGCCTTCaaaa                              >  1:3303531/1‑36 (MQ=255)       ccAGACCGAAGTCCTGACCCCCGCCGCCTTCAAAAg                             <  1:1743604/36‑1 (MQ=255)         aGAGCGAAGTCCTGACCCCCGCCGCCTGCAAAAGCg                           <  1:4972358/36‑1 (MQ=25)          gACCGAAGTCCTGACCCCAGCCGCCTTCAAAAGCGa                          <  1:407906/36‑1 (MQ=255)           aCCGAAGTCCTGACCCCCGCCGCCTTCAAAAGCGAt                         <  1:4849764/36‑1 (MQ=255)            ccGAAGTCCGGACCCCCGCCGCCTTCAAAAGCGaag                        <  1:7446690/36‑3 (MQ=25)             cGAAGTCCTGACCCCCGCCGCCTTCAAAAGCGATGc                       <  1:6476924/36‑1 (MQ=255)             cGAAGTCCTGACCCCCGCCGCCTTCAAAAGCGATGc                       >  1:4438109/1‑36 (MQ=255)             cGAAGTCCTGACCCCCGCCGCCTTCAAAAGCGATGc                       >  1:3472804/1‑36 (MQ=255)              gAAGTCCTGACCCCCGCCGCCTTCAAAAGCGATGCg                      >  1:1623341/1‑36 (MQ=255)                aGTCCTGACCCCCGCCGCCTTCAAAAGCGATGCGGt                    <  1:4674721/36‑1 (MQ=255)                aGTCCTGACCCCCGCCGCCTTCAAAAGCGATGCGGt                    <  1:2569775/36‑1 (MQ=255)                 ttCCTAACCCCCGCCGCCTTCAAAAGCGATGCGGTa                   <  1:497059/35‑1 (MQ=255)                 gTCCTCACCCCCGCCACCTTCAAAAGCGATGCGGTa                   <  1:3602350/36‑1 (MQ=25)                  tCCTGACCCCCGCCGCCTTCAAAAGCGATGCGGTAg                  >  1:1869571/1‑36 (MQ=255)                  tCCGGACCCCCGCCGCCTTCAACAGCGCTGCGGTAg                  <  1:7202961/36‑1 (MQ=21)                   ccTGACCCCCGCCGCCTTCAAAAGCGATGCGGTAgg                 <  1:7042774/36‑1 (MQ=255)                    cTGACCCCCGCCGCCTTCAAAAGCGATGCGGTAGgt                <  1:5481974/36‑1 (MQ=255)                     tGACCCCCGCCGCCTTCAAAAGCGATGCGGTAGgtg               >  1:565554/1‑36 (MQ=255)                     tGACCCCCGCCGCCTTCAAAAGCGATGCGGTAGgtg               >  1:4665915/1‑36 (MQ=255)                      gACCCCCGCCGCCTTCAAAAGCGATGCGGTAggggg              >  1:6855960/1‑33 (MQ=255)                      gACCCCCGCCGCCTTCAAAAGCGATGCGGTAGgtgt              <  1:1272061/36‑1 (MQ=255)                       aCCCCCGCCGCCTTCAAAAGCGATGCGGTAGGTGTa             <  1:3385190/36‑1 (MQ=255)                       aCCCCCGCCGCCTTCAAAAGCGATGCGGTAGGTGTa             <  1:3579761/36‑1 (MQ=255)                        cccccGCCGCCTTCAAAAGCGATGCGGTAGgtgttg            >  1:2230172/1‑34 (MQ=255)                        cccccGCCGCCTTCAAAAGCGATGCGGTAGGAGTAg            >  1:1274565/1‑36 (MQ=255)                        cccccGCCGCCTTCAAAAGCGATGCGGGAGGTGTAg            >  1:6771857/1‑36 (MQ=255)                          cccGCCGCCTTCAAAAGCGATGCGGTAGGTGTAGtt          <  1:1736957/36‑1 (MQ=255)                          cccGCCGCCTTCAAAAGCGATGCGGTAGGTGTAGtt          <  1:4228650/36‑1 (MQ=255)                             gccgccTTCAAAAGCGATGCGGTAGGGGTAGTTatc       >  1:2771282/1‑34 (MQ=25)                              ccgccTTCAAAAGCGATGGGGTAGGTGTTGTTAACa      >  1:7041271/1‑36 (MQ=25)                               cgccTTCAAAAGCGATGCGGTAGGTGTAGTTAACaa     <  1:6980368/36‑1 (MQ=255)                               cgccTTCAAAAGCGATGCGGTAGGTGTAGTTAACaa     >  1:4691238/1‑36 (MQ=255)                                gccTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAg    <  1:447232/36‑1 (MQ=255)                                gccTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAg    <  1:7215178/36‑1 (MQ=255)                                accTACAAAAGCGATGCGGTAGGTGTAGTTAACAAg    <  1:7488137/35‑1 (MQ=255)                                 ccTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAGc   >  1:5602136/1‑36 (MQ=255)                                  cTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAGCa  <  1:6079851/36‑1 (MQ=255)                                  cTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAGCa  >  1:4983096/1‑36 (MQ=255)                                  cTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAGCa  <  1:3078765/36‑1 (MQ=255)                                  |                                    CTGCCGCCAGACCGAAGTCCTGACCCCCGCCGCCTTCAAAAGCGATGCGGTAGGTGTAGTTAACAAGCA  >  REL606/4222543‑4222611 Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 17 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG