New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 = 341747365 (1.540)12 (0.280) 6/54 3.9 coding (613/1221 nt) argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase
?REL606 = 4222576 45 (0.820)coding (1432/1545 nt) malF maltose transporter subunit
Rejected: Position hash score below cutoff.

AGCCCTGCAAAAACTCTGGCGT..........................  >  REL606/3417452‑3417473
..............................GGCGGCGGGGGTCAGGAC  <  REL606/4222576‑4222559
                      ||||||||                  
AGCCCTGCAAAAACTCTGGCGTGAAGACCTGGCGGC              >  1:176049/1‑36 (MQ=255)
AGCCCTGCAAAAACTCTGGCGTGAAGACCTGGCGGC              >  1:5955761/1‑36 (MQ=255)
AGCCCTGCAAAAACTCTGGCGTGAAGACCTGGCGGC              <  1:7246265/36‑1 (MQ=255)
AGCCCTGCAAAAACTCTGGCGTGAAGACATGGCGGt              >  1:4491694/1‑35 (MQ=255)
 GCCCTGCAAAAACTCTGGCGTGAAGACCTGGCGGCG             <  1:2361822/36‑1 (MQ=255)
 GCCCTGCAAAAACTCTGGCGTGAAGACCTGGCGGCG             >  1:5531569/1‑36 (MQ=255)
   CCTGCAAAAACTCTGGCGTGAAGACCTGGCGGCGGG           >  1:113068/1‑36 (MQ=255)
    CTGCAAAAACTCTGGCGTGAAGACCTGGCGGCCGGG          >  1:5039214/1‑36 (MQ=255)
     TGCAAAAACTCTGGCGTGAAGACCTGGCGGCGGGGG         >  1:1988625/1‑36 (MQ=255)
       CAAAAACTCTGGCGTGAAGACCTGGCGGCGGGGGTC       >  1:3392842/1‑36 (MQ=255)
        AAAAACTCTGGCGTGAAGACCTGGCGGCGGGGGTCA      >  1:745410/1‑36 (MQ=255)
            ACTCTGGCGTGAAGACCTGGCGGCGGGGGTCAAGAC  >  1:2306552/1‑36 (MQ=255)
                      ||||||||                  
AGCCCTGCAAAAACTCTGGCGT..........................  >  REL606/3417452‑3417473
..............................GGCGGCGGGGGTCAGGAC  <  REL606/4222576‑4222559

Base quality scores:  ATCG  < 3 ≤  ATCG  < 5 ≤  ATCG  < 16 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG