Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 3,015,771 IS150 (–) +4 bp coding (1192‑1195/1677 nt) ECB_02816 KpsD protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew annotation gene product
* ? REL606 588495 =NA (NA)49 (0.950) 33/66 0.2 noncoding (1/1977 nt) IS150 repeat region
?REL606 3015771 = 57 (1.040)coding (1192/1677 nt) ECB_02816 KpsD protein
* ? REL606 = 301577458 (1.120)47 (0.910) 32/66 0.2 coding (1195/1677 nt) ECB_02816 KpsD protein
?REL606 = 3652533 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 116 total aligned reads displayed.

ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTG  >  REL606/3015739‑3015809
                                   |                                   
aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT                                     >  1:3297775‑M1/1‑36 (MQ=255)
aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT                                     >  1:6118039‑M1/1‑36 (MQ=255)
aTCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT                                     <  1:188746‑M1/36‑1 (MQ=255)
  ttcatcgtccagcaaaatgggtgcagtacaCTTTCt                                   <  1:3007280‑M2/6‑1 (MQ=255)
  ctctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtg                                   >  1:4067727‑M1/1‑34 (MQ=255)
   tctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgt                                  <  1:5039861‑M1/36‑4 (MQ=255)
   tctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgt                                  >  1:4111301‑M1/1‑33 (MQ=255)
   tctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgt                                  >  1:5209127‑M1/1‑33 (MQ=255)
   tctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgt                                  >  1:5653312‑M1/1‑33 (MQ=255)
   tctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgt                                  <  1:1140254‑M1/36‑4 (MQ=255)
   tcatcgtccgacaaaatgggtgcagtacaCTTTCTg                                  >  1:1294855‑M2/30‑36 (MQ=255)
   tcatcgtccaacaaaatgggtgcagtacaCTTTCTg                                  <  1:5269797‑M2/7‑1 (MQ=255)
    ctcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgta                                 <  1:6232895‑M1/36‑5 (MQ=255)
    catcgtccaacaaaatgggtgcagtacaCTTTCTGc                                 <  1:3212360‑M2/8‑1 (MQ=255)
    catcgtccaacaaaatgggtgcagtacaCTTTCTGc                                 >  1:791289‑M2/29‑36 (MQ=255)
     tcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgtac                                >  1:1176597‑M1/1‑31 (MQ=255)
     tcGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgtac                                >  1:1278072‑M1/1‑31 (MQ=255)
     atcgtccaacaaaatgggtgcagtacaCTTTCTGcc                                >  1:7402286‑M2/28‑36 (MQ=255)
      tcgtccaacaaaatgggtgcagtacaCTTTCTGccc                               >  1:2109187‑M2/27‑36 (MQ=255)
      cGCTGCAAAAGCTGGAGGAAGCCTCACTTTtgtact                               <  1:3464218‑M1/36‑7 (MQ=255)
        gtccaacaaaatgggtgccgtacaCTTTCTGCCCAg                             >  1:5746435‑M2/25‑36 (MQ=255)
        gtccaacaaaatgggtgcagtacaCTTTCTGCCCAg                             <  1:5365234‑M2/12‑1 (MQ=255)
        cTGCAAAAGCTGGAGGAAGCCTCACTTTtgtactga                             >  1:2794001‑M1/1‑28 (MQ=255)
         tccaacaaaatgggtgcagtacaCTTTCTGCTCAGt                            <  1:6396544‑M2/13‑1 (MQ=255)
         tccaacaaaatgggtgcagtacaCTTTCTGCCCAGt                            >  1:3464077‑M2/24‑36 (MQ=255)
         tccaacaaaatgggtgcagtacaCTTTCTGCCCAGt                            <  1:312984‑M2/13‑1 (MQ=255)
          gCAAAAGCTGGAGGAAGCCTCACTTTtgtactgacc                           <  1:676952‑M1/36‑11 (MQ=255)
           caacaaaatgggtgcagtacaCTTTCTGCCCAGTCa                          >  1:6987641‑M2/22‑36 (MQ=255)
           caacaaaatgggtgcagtacaCTTTCTGCCCAGTCa                          >  1:6048984‑M2/22‑36 (MQ=255)
            aagagctGGAGGAAGCCTCACTTTtgtactgacccc                         <  1:652336‑M1/33‑13 (MQ=255)
            aacaaaatgggtgcagtacaCTTTCTGCCCAGTCAt                         <  1:1538542‑M2/16‑1 (MQ=255)
            aaaaGCTGGAGGAAGCCTCACTTTtgtactgacccc                         <  1:2299269‑M1/36‑13 (MQ=255)
             acaaaattggtgcagtacaCTTTCTGCCCAGTCATc                        <  1:3912889‑M2/17‑1 (MQ=255)
             aaaGCTGGAGGAAGCCTCACTTTtgtactgacccca                        <  1:2612123‑M1/36‑14 (MQ=255)
             aaaGCTGGAGGAAGCCTCACTTTtgtactgacccca                        >  1:5698634‑M1/1‑23 (MQ=255)
              aaGCTGGAGGAAGCCTCACTTTtgtactgaccccaa                       >  1:5307142‑M1/1‑22 (MQ=255)
               aaaatgggtgcagtacaCTTTCTGCCCAGTTATcca                      >  1:3118564‑M2/18‑36 (MQ=255)
               aaaatgggtgcagtacaCTTTCTGCCCAGTCATcca                      >  1:3012721‑M2/18‑36 (MQ=255)
               aaaatgggtgcagtacaCTTTCTGCCCAGTCATcca                      >  1:2688366‑M2/18‑36 (MQ=255)
               aaaatgggtgcagtacaCTTTCTGCCCAGTCATcca                      >  1:26606‑M2/18‑36 (MQ=255)
               aGCTGGAGGAAGCCTCACTTTagtactgaccccaaa                      >  1:3570011‑M1/1‑21 (MQ=255)
                gCTGGAGGAAGCCTCACTTTtgtactgaccccaaaa                     >  1:2365250‑M1/1‑20 (MQ=255)
                gCTGGAGGAAGCCTCACTTTtgtactgaccccaaaa                     >  1:6216316‑M1/1‑20 (MQ=255)
                aaatgggtgcagtacaCTTTCTGCCCAGTCATccac                     <  1:1787012‑M2/20‑1 (MQ=255)
                aaaggggtgcagtacaCTTTCTGCCCAGTCATccac                     <  1:5811601‑M2/20‑1 (MQ=255)
                 aatgggcgcagtacaCTTTCTGCCCAGTCATccacc                    >  1:6367861‑M2/16‑36 (MQ=255)
                  atgggtgcagtacaCTTTCTGCCCAGTCatccacta                   >  1:2764810‑M2/15‑34 (MQ=255)
                   tgggtgcagtaccCTTTCTGCCCAGTCATCCACCaa                  >  1:5523567‑M2/14‑36 (MQ=255)
                   tgggtgcagtacaCTTTCTGCCCAGTCATCCACCaa                  <  1:4169868‑M2/23‑1 (MQ=255)
                   ggaggaAGCCTCACTTTtgtactgaccccaaaaagt                  >  1:3520078‑M1/1‑17 (MQ=255)
                   ggaggaAGCCTCACTTTtgtactgaccccaaaaagt                  >  1:7170893‑M1/1‑17 (MQ=255)
                    gggtgcagtacaCTTTCTGCCCAGTCATCCACCaaa                 <  1:892269‑M2/24‑1 (MQ=255)
                     ggtgcagtacaCTTTCTGCCCAGTCATCCAccaacg                >  1:455081‑M2/12‑34 (MQ=255)
                      gtgcagtacaCTTTCTGCCCAGTCATCCACCAaaga               >  1:1122133‑M2/11‑36 (MQ=255)
                      gtgcagtacaCTTTCTGCCCAGTCATCCACCAaaga               >  1:764288‑M2/11‑36 (MQ=255)
                      gtgcagtacaCTTTCTGCCCAGTCATCCACCAaaga               >  1:7416139‑M2/11‑36 (MQ=255)
                      gtgcagtacaCTTTCTGCCCAGTCATCCACCAaaga               >  1:289823‑M2/11‑36 (MQ=255)
                      ggaAGCCTCACTTTtgtactgaccccaaaaagttgg               <  1:3223186‑M1/36‑23 (MQ=255)
                      ggaAGCCTCACTTTtgtactgaccccaaaaagttgg               >  1:2976673‑M1/1‑14 (MQ=255)
                       gaAGCCTCACTTTtgtactgaccccaaaacgttgga              >  1:4495874‑M1/1‑13 (MQ=255)
                       gaAGCCTCACTTTtgtactgaccccaaaaagttgga              <  1:6289932‑M1/36‑24 (MQ=255)
                        aaGCCTCACTTTtgtactgaccccaaaaggttggac             <  1:5356089‑M1/36‑25 (MQ=255)
                         aGCCTCACTTTtgtactgaccccaacaagttggaca            >  1:848799‑M1/1‑11 (MQ=255)
                         aGCCTCACTTTtgtactgaccccaaaaagttggaca            >  1:5111527‑M1/1‑11 (MQ=255)
                          gCCTCACTTTtgtactgaccccaaaaagttggacag           >  1:7125022‑M1/1‑10 (MQ=255)
                          agtacaCTTTCTGCCCAGTCATCCACCAaagaagaa           <  1:3279116‑M2/30‑1 (MQ=255)
                            tacaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGc         >  1:1779211‑M2/5‑36 (MQ=255)
                            tacaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGc         >  1:3111387‑M2/5‑36 (MQ=255)
                            tacaCTTGCTGCCCAGTCATCCACCAAAGAAGAAGc         <  1:7300906‑M2/32‑1 (MQ=255)
                            cTCACTTTtgtactgaccccaaaaagttggacagtt         >  1:2861377‑M1/1‑8 (MQ=255)
                            cTCACTTTtgtactgaccccaaaaagttggacagtt         <  1:3970802‑M1/36‑29 (MQ=255)
                             tCACTTTtgtactgaccccaaaaagttggacagtta        >  1:2435280‑M1/1‑7 (MQ=255)
                             acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc        >  1:3060729‑M2/4‑36 (MQ=255)
                             acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc        <  1:2628850‑M2/33‑1 (MQ=255)
                             acaCTTTCTGCCCAGTCATCCACCAAAGAAGAAGcc        <  1:1645864‑M2/33‑1 (MQ=255)
                             acACTATCAGCCCAGACATCCACCAAAGAAGAagcc        <  1:3209652/35‑1 (MQ=21)
                              caCTTTCTGCCCAGTCATCCACCAAAGACGAAGCCa       >  1:4535629‑M2/3‑36 (MQ=255)
                              cACTTTtgtactgaccccaaaaagttggacagttaa       >  1:577402‑M1/1‑6 (MQ=255)
                               aCTTTtgtactgaccccaaaaagttggacagttaaa      >  1:396217‑M1/1‑5 (MQ=255)
                               aCTTTtgtactgaccccaaaaagttggacagttaaa      <  1:4029203‑M1/36‑32 (MQ=255)
                               aCTTTtgtactgaccccaaaaagttggacagttaaa      >  1:5007517‑M1/1‑5 (MQ=255)
                               aCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAg      <  1:77937‑M2/35‑1 (MQ=255)
                               aCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAg      >  1:1928816‑M2/2‑36 (MQ=255)
                               aCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAg      >  1:6473681‑M2/2‑36 (MQ=255)
                                cTTTtgtactgaccccaaaaagttggacagttaaac     <  1:2692004‑M1/36‑33 (MQ=255)
                                cTTTCTGCCCAGTCATCCACCAAAGAAGAagccagc     >  1:2504498/1‑36 (MQ=255)
                                cTTTCTGCCCAGTCATCCACCAAAGAAGAagccagc     <  1:2673107/36‑1 (MQ=255)
                                cTTTCTGCCCAGTCATCCACCAAAGAAGAagccagc     >  1:4661502/1‑36 (MQ=255)
                                cTTTCTGCCCAGTCATCCACCAAAGAAGAagccagc     >  1:5001454/1‑36 (MQ=255)
                                 ttttgtactgaccccaaaaagttggacagttaaaca    >  1:6800979‑M1/1‑3 (MQ=255)
                                  tttgtactgaccccaaaaagttggacagttaaacac   <  1:2969682‑M1/36‑35 (MQ=255)
                                  ttCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCt   <  1:6482484/36‑1 (MQ=255)
                                  ttCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCt   <  1:825625/36‑1 (MQ=255)
                                   ttgtactgaccccaaaaagttggacagttaaacacg  >  1:1916519‑M1/1‑1 (MQ=255)
                                   ttgtactgaccccaaaaagttggacagttaaacacg  <  1:4840394‑M1/36‑36 (MQ=255)
                                   ttgtactgaccccaaaaagttggacagttaaacacg  >  1:5219858‑M1/1‑1 (MQ=255)
                                   ttgtactgaccccaaaaagttggacagttaaacacg  >  1:4265376‑M1/1‑1 (MQ=255)
                                   ttgtactgaccccaaaaagttggacagttaaacacg  >  1:4994241‑M1/1‑1 (MQ=255)
                                   ttgtactgaccccaaaaagttggacagttaaacacg  <  1:490564‑M1/36‑36 (MQ=255)
                                   tCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTg  <  1:6681533/36‑1 (MQ=255)
                                   |                                   
ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTG  >  REL606/3015739‑3015809

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG