BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	REL606	3,015,771	IS150 (–) +4 bp	coding (1192‑1195/1677 nt)	ECB_02816	KpsD protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	annotation	gene	product
*	?	REL606	588495 =	NA (NA)	49 (0.950)	33/66	0.2	noncoding (1/1977 nt)	IS150	repeat region
*	?	REL606	3015771 =	57 (1.040)	49 (0.950)	33/66	0.2	coding (1192/1677 nt)	ECB_02816	KpsD protein
*	?	REL606	= 3015774	58 (1.120)	47 (0.910)	32/66	0.2	coding (1195/1677 nt)	ECB_02816	KpsD protein
*	?	REL606	= 3652533	NA (NA)	47 (0.910)	32/66	0.2	noncoding (1443/1443 nt)	IS150	repeat region


AATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT...................................  >  REL606/3015738‑3015774


...................................TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  <  REL606/3652533‑3652499


AATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTT                                      <  1:872366/36‑1 (MQ=255)


AATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTT                                      <  1:5879958/36‑1 (MQ=255)


AATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTT                                      >  1:1318575/1‑36 (MQ=255)


 ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT                                     >  1:6118039/1‑36 (MQ=255)


 ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT                                     <  1:188746/36‑1 (MQ=255)


 ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT                                     >  1:3297775/1‑36 (MQ=255)


   CTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTG                                   >  1:4067727/1‑36 (MQ=255)


    TCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGT                                  >  1:5653312/1‑36 (MQ=255)


    TCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGT                                  >  1:5209127/1‑36 (MQ=255)


    TCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGT                                  <  1:5039861/36‑1 (MQ=255)


    TCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGT                                  >  1:4111301/1‑36 (MQ=255)


    TCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGT                                  <  1:1140254/36‑1 (MQ=255)


     CTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGTA                                 <  1:6232895/36‑1 (MQ=255)


      TCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGTAC                                >  1:1176597/1‑36 (MQ=255)


      TCGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGTAC                                >  1:1278072/1‑36 (MQ=255)


       CGCTGCAAAAGCTGGAGGAAGCCTCACTTTTGTACT                               <  1:3464218/36‑1 (MQ=255)


        GCTGCAAAAGCTGGAGGAAGCCTCACTTTTGTACTG                              >  1:3867044/1‑36 (MQ=255)


        GCTGCAAAAGCTGGAGGAAGCCTCACTCTTGTACTG                              >  1:3234402/1‑36 (MQ=255)


         CTGCAAAAGCTGGAGGAAGCCTCACTTTTGTACTGA                             >  1:2794001/1‑36 (MQ=255)


         CTGCAAAAGATGGAGGAAGCCTCACTTTTGTACTGA                             >  1:1716309/1‑36 (MQ=255)


           GCAAAAGCTGGAGGAAGCCTCACTTTTGTACTGACC                           <  1:676952/36‑1 (MQ=255)


             aagAGCTGGAGGAAGCCTCACTTTTGTACTGACCCC                         <  1:652336/33‑1 (MQ=255)


             AAAAGCTGGATGAAGCCTCACTTTTGTACTGACCCC                         <  1:681680/36‑1 (MQ=255)


             AAAAGCTGGAGGAAGCCTCACTTTTGTACTGACCCC                         <  1:2299269/36‑1 (MQ=255)


              AAAGCTGGAGGAAGCCTCACTTTTGTACTGACCCCA                        >  1:5698634/1‑36 (MQ=255)


              AAAGCTGGAGGAAGCCTCACTTTTGTACTGACCCCA                        <  1:2612123/36‑1 (MQ=255)


               AAGCTGGAGGAAGCCTCACTTTTGTACTGACCCCAA                       >  1:5307142/1‑36 (MQ=255)


                AGCTGGAGGAAGCCTCACTTTAGTACTGACCCCAAA                      >  1:3570011/1‑36 (MQ=255)


                 GCTGGAGGAAGCCTCACTTTTGTACTGACCCCAAAA                     >  1:2365250/1‑36 (MQ=255)


                 GCTGGAGGAAGCCTCACTTTTGTACTGACCCCAAAA                     >  1:6216316/1‑36 (MQ=255)


                   TGGAGGAAGCCTCACTTTTGTACTGACCCCAAAAAG                   >  1:3094531/1‑36 (MQ=255)


                    GGAGGAAGCCTCACTTTTGTACTGACCCCAAAAAGT                  >  1:7170893/1‑36 (MQ=255)


                    GGAGGAAGCCTCACTTTTGTACTGACCCCAAAAAGT                  >  1:3520078/1‑36 (MQ=255)


                       GGAAGCCTCACTTTTGTACTGACCCCAAAAAGTTGG               >  1:2976673/1‑36 (MQ=255)


                       GGAAGCCTCACTTTTGTACTGACCCCAAAAAGTTGG               <  1:3223186/36‑1 (MQ=255)


                        GAAGCCTCACTTTTGTACTGACCCCAAAACGTTGGA              >  1:4495874/1‑36 (MQ=255)


                        GAAGCCTCACTTTTGTACTGACCCCAAAAAGTTGGA              >  1:7439060/1‑36 (MQ=255)


                        GAAGCCTCACTTTTGTACTGACCCCAAAAAGTTGGA              <  1:6289932/36‑1 (MQ=255)


                         AAGCCTCACTTTTGTACTGACCCCAAAAGGTTGGAC             <  1:5356089/36‑1 (MQ=255)


                          AGCCTCACTTTTGTACTGACCCCAACAAGTTGGACA            >  1:848799/1‑36 (MQ=255)


                          AGCCTCACTTTTGTACTGACCCCAAAAAGTTGGACA            >  1:5111527/1‑36 (MQ=255)


                           GCCTCACTTTTGTACTGACCCCAAAAAGTTGGACAG           >  1:544242/1‑36 (MQ=255)


                           GCCTCACTTTTGTACTGACCCCAAAAAGTTGGACAG           >  1:7125022/1‑36 (MQ=255)


                             CTCACTTTTGTACTGACCCCAAAAAGTTGGACAGTT         <  1:5136678/36‑1 (MQ=255)


                             CTCACTTTTGTACTGACCCCAAAAAGTTGGACAGTT         <  1:3970802/36‑1 (MQ=255)


                             CTCACTTTTGTACTGACCCCAAAAAGTTGGACAGTT         >  1:2861377/1‑36 (MQ=255)


                              TCACTTTTGTACTGACCCCAAAAAGTTGGACAGTTA        >  1:2435280/1‑36 (MQ=255)


                               CACTTTTGTACTGACCCCAAAAAGTTGGACAGTTAA       >  1:577402/1‑36 (MQ=255)


                                ACTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA      >  1:5007517/1‑36 (MQ=40)


                                ACTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA      >  1:396217/1‑36 (MQ=40)


                                ACTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA      <  1:4029203/36‑1 (MQ=40)


                                 CTTTTGTACTGACCCCAAAAAGTTGGACAGTTAAAC     <  1:2692004/36‑1 (MQ=38)


                                  TTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACA    >  1:6800979/1‑36 (MQ=35)


                                   TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACAC   <  1:2969682/36‑1 (MQ=32)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  <  1:263649/36‑1 (MQ=1)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  1:4265376/1‑36 (MQ=1)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  <  1:4840394/36‑1 (MQ=1)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  <  1:490564/36‑1 (MQ=1)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  1:4994241/1‑36 (MQ=1)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  1:5219858/1‑36 (MQ=1)


                                    TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  >  1:1916519/1‑36 (MQ=1)


AATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT...................................  >  REL606/3015738‑3015774


...................................TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACG  <  REL606/3652533‑3652499

Base quality scores:


ATCG

< 3 ≤


ATCG

< 12 ≤


ATCG

< 20 ≤


ATCG

< 30 ≤


ATCG

< 32 ≤


ATCG