New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 222 = 14430 (0.000)77 (1.170) 57/198 0.1 98.7% intergenic (–/–) –/– –/–
?96 = 5653 2 (0.030)intergenic (–/–) –/– –/–

Only 100 of 146 total aligned reads displayed.

TCAGTTGCTGTTGACTGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTGCG  >  96/5553‑5750
                                                                                                    |                                                                                                 
tCAGTTGCTGTTGACTGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGttt                                                                                                   >  1:1100402/1‑101 (MQ=255)
   gTTGCTGTTGACTGGAGCGGCTGGTGTTGAACTGGAAGCCCCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgt                                                                                                <  2:743990‑M2/101‑4 (MQ=255)
     tcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCt                                                                                              <  2:1153736‑M2/8‑1 (MQ=255)
      cacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTc                                                                                             <  2:478170‑M2/9‑1 (MQ=255)
       cTGTTGACTGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactg                                                                                            <  2:782424‑M2/101‑8 (MQ=255)
        tGTTGACTGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactga                                                                                           <  2:1104558‑M2/101‑9 (MQ=255)
        cgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCgg                                                                                           <  1:1008536‑M2/11‑1 (MQ=255)
         gTTGACTGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgac                                                                                          <  2:833020‑M2/101‑10 (MQ=255)
               tGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaa                                                                                    <  1:36198‑M2/101‑16 (MQ=255)
               aaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACg                                                                                    >  2:888230‑M2/84‑101 (MQ=255)
                 ggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTa                                                                                  <  1:1700907‑M2/20‑1 (MQ=255)
                 ggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTa                                                                                  <  1:713390‑M2/20‑1 (MQ=255)
                  gcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTAc                                                                                 <  2:1562891‑M2/21‑1 (MQ=255)
                  aGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaag                                                                                 >  1:163809‑M2/1‑83 (MQ=255)
                     ggCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttg                                                                              >  2:143911‑M2/1‑80 (MQ=255)
                      gCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttgg                                                                             >  1:1352248‑M2/1‑79 (MQ=255)
                        ttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGta                                                                           <  2:1560285‑M2/27‑1 (MQ=255)
                        ttcaaaagggaattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGta                                                                           >  2:448405‑M2/75‑101 (MQ=255)
                        tGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggac                                                                           <  2:272453‑M2/101‑25 (MQ=255)
                         tcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGtat                                                                          >  1:964542‑M2/74‑101 (MQ=255)
                         gATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggaca                                                                          >  1:1266820‑M2/1‑76 (MQ=255)
                          aTGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacag                                                                         >  1:683094‑M2/1‑75 (MQ=255)
                          aTGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacag                                                                         >  2:89363‑M2/1‑75 (MQ=255)
                          aTGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacag                                                                         <  1:44809‑M2/101‑27 (MQ=255)
                           tGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagt                                                                        >  1:524127‑M2/1‑74 (MQ=255)
                           tGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagt                                                                        >  2:469548‑M2/1‑74 (MQ=255)
                             aagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACAt                                                                      <  1:1503886‑M2/32‑1 (MQ=255)
                             aagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACAt                                                                      <  1:1523648‑M2/32‑1 (MQ=255)
                                ggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTc                                                                   >  2:602997‑M2/67‑101 (MQ=255)
                                ggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTc                                                                   >  2:597081‑M2/67‑101 (MQ=255)
                                  cTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactggccccaaaaagttggacagttaaacac                                                                 >  2:1103025‑M2/1‑67 (MQ=255)
                                   attttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGa                                                                >  2:145076‑M2/64‑101 (MQ=255)
                                     tttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACa                                                              >  2:1626948‑M2/62‑101 (MQ=255)
                                     gAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtattgaccccaaaaagttggacagttaaacacgag                                                              >  1:130019‑M2/1‑64 (MQ=255)
                                       aGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggc                                                            <  1:1331697‑M2/101‑40 (MQ=255)
                                          ctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGc                                                         >  2:652375‑M2/57‑101 (MQ=255)
                                           tttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGGATACATGTCTGACAATGGCa                                                        >  2:301632‑M2/56‑101 (MQ=255)
                                             cgcgCCACTGGTGTGGGTTATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTGTtgtactggccccaaaaagttggacagttaaacacgaggcatatag                                                      >  2:1549597‑M2/1‑56 (MQ=255)
                                                gcCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgacccctaaaagttggacagttaaacacgaggcatataggtc                                                   <  1:198538‑M2/101‑49 (MQ=255)
                                                gcCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc                                                   <  1:1345578‑M2/101‑49 (MQ=255)
                                                gcCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtc                                                   <  1:244498‑M2/101‑49 (MQ=255)
                                                 atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATccc                                                  >  1:1049853‑M2/50‑101 (MQ=255)
                                                 atattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGGATACATGTCTGACAATGGCAGATacc                                                  >  2:947893‑M2/50‑101 (MQ=255)
                                                   attaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGAAGATCCCAg                                                <  1:997508‑M2/54‑1 (MQ=255)
                                                     taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCg                                              <  1:1069537‑M2/56‑1 (MQ=255)
                                                      ggTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc                                             >  1:743995‑M2/1‑47 (MQ=255)
                                                       gtgtGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc                                            >  1:1373032‑M2/1‑46 (MQ=255)
                                                       gtgtGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc                                            >  1:950133‑M2/1‑46 (MQ=255)
                                                         ggctattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCa                                          >  2:279720‑M2/42‑101 (MQ=255)
                                                          tgGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgat                                         >  1:312373‑M2/1‑43 (MQ=255)
                                                          tgGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgat                                         <  1:426572‑M2/101‑59 (MQ=255)
                                                            tattccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCaaaa                                       >  1:705704‑M2/39‑101 (MQ=255)
                                                             attccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAAc                                      <  1:1617503‑M2/64‑1 (MQ=255)
                                                              ttccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACa                                     <  2:1443648‑M2/65‑1 (MQ=255)
                                                               tccatttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAg                                    >  1:851477‑M2/36‑101 (MQ=255)
                                                               cATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattca                                    <  2:679658‑M2/101‑64 (MQ=255)
                                                               cATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattca                                    <  2:827510‑M2/101‑64 (MQ=255)
                                                                ccatttcatcttccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAgg                                   <  2:1482869‑M2/67‑1 (MQ=255)
                                                                 tAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaat                                  >  1:782429‑M2/1‑36 (MQ=255)
                                                                 tAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaat                                  <  1:849792‑M2/101‑66 (MQ=255)
                                                                  atttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAggcg                                 <  2:403387‑M2/69‑1 (MQ=255)
                                                                  aattcaattcGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaatttggacagttaaacacgaggcatataggtctgattccgatattcaatt                                 >  2:544369‑M2/1‑35 (MQ=255)
                                                                   tttcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAggcgg                                >  2:1305876‑M2/32‑101 (MQ=255)
                                                                   attcaattcGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattg                                <  2:485568‑M2/101‑68 (MQ=255)
                                                                    ttcaattcGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgg                               >  2:1610523‑M2/1‑33 (MQ=255)
                                                                    ttcaattcGCGCGTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgg                               >  2:447575‑M2/1‑33 (MQ=255)
                                                                     tcatcgtccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCa                              <  2:1405212‑M2/72‑1 (MQ=255)
                                                                            ccaacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGc                       >  1:1624774‑M2/23‑101 (MQ=255)
                                                                              aacaaaatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCgg                     <  2:739834‑M2/81‑1 (MQ=255)
                                                                               tgTCCCGCAGCGCAGACCGTTTTCGCTCGGGAAGACGTACGGGGTATACATGTATGACAATGGCAGATCCCAGCGGTCAAAACAGGCTGCAGTACGGCGGt                    >  1:1267022/2‑101 (MQ=255)
                                                                               cgTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctt                    >  1:309537‑M2/1‑22 (MQ=255)
                                                                               cgTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctt                    <  1:519299‑M2/101‑80 (MQ=255)
                                                                                gTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttt                   <  1:1354710‑M2/101‑81 (MQ=255)
                                                                                gTCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttt                   <  1:943450‑M2/101‑81 (MQ=255)
                                                                                 tCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttt                  >  2:1161420‑M2/1‑20 (MQ=255)
                                                                                 tCCCGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttt                  <  2:54680‑M2/101‑82 (MQ=255)
                                                                                  cccGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttta                 >  1:1174046‑M2/1‑19 (MQ=255)
                                                                                   ccGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaa                >  2:1043033‑M2/1‑18 (MQ=255)
                                                                                   ccGCAGCGCAGACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaa                >  1:272453‑M2/1‑18 (MQ=255)
                                                                                   aatgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCggg                >  1:978483‑M2/16‑101 (MQ=255)
                                                                                    atgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGa               >  2:692527‑M2/15‑101 (MQ=255)
                                                                                    atgggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGa               >  2:1226632‑M2/15‑101 (MQ=255)
                                                                                      gggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATa             >  1:819916‑M2/13‑101 (MQ=255)
                                                                                      gggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATa             >  1:737285‑M2/13‑101 (MQ=255)
                                                                                       ggtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAg            >  1:1384627‑M2/12‑101 (MQ=255)
                                                                                        gtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGt           <  1:597086‑M2/91‑1 (MQ=255)
                                                                                        gtgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGt           >  1:478521‑M2/11‑101 (MQ=255)
                                                                                         tgcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGtt          <  2:1624768‑M2/92‑1 (MQ=255)
                                                                                         cgcagACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcag          >  1:617347‑M2/1‑12 (MQ=255)
                                                                                          gcagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGGCGGGATAGttt         >  2:101737‑M2/9‑101 (MQ=255)
                                                                                           cagtacaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGtttt        >  2:1159056‑M2/8‑101 (MQ=255)
                                                                                             gACCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggcta      >  2:776220‑M2/1‑8 (MQ=255)
                                                                                              aCCGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaa     <  1:14055‑M2/101‑95 (MQ=255)
                                                                                               acaTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTg    >  2:1212339‑M2/4‑101 (MQ=255)
                                                                                                caTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTGc   <  2:18774‑M2/99‑1 (MQ=255)
                                                                                                cGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaatt   <  1:254758‑M2/101‑97 (MQ=255)
                                                                                                cGTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaatt   <  2:943558‑M2/101‑97 (MQ=255)
                                                                                                 gTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattc  <  1:1630080‑M2/101‑98 (MQ=255)
                                                                                                 gTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattc  >  1:1397420‑M2/1‑4 (MQ=255)
                                                                                                 gTTTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattc  <  2:220493‑M2/101‑98 (MQ=255)
                                                                                                    |                                                                                                 
TCAGTTGCTGTTGACTGTAGCGGCTGATGTTGAACTGGAAGTCGCCGCGCCACTGGTGTGGGCCATAATTCAATTCGCGCGTCCCGCAGCGCAGACCGTTTTCGCTCGGGAAGACGTACGGGGTATACATGTCTGACAATGGCAGATCCCAGCGGTCAAAACAGGCGGCAGTAAGGCGGTCGGGATAGTTTTCTTGCG  >  96/5553‑5750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.