| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 150 | 3637 = | 23 (0.350) | 38 (0.760) +GGCGTAAACGCCTTATCCGGCCTAC |
29/150 | 0.7 | 81.5% | intergenic (–/–) | –/– | –/– |
| ? | 27 | = 39041 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CTAAAACTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 27/38941‑39041 | cTAAAACTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAcc > 1:596388/1‑101 (MQ=255)cTAAAACTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAcc > 2:1478782/1‑101 (MQ=255) tAAAACTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCg > 2:1428109‑M2/1‑100 (MQ=255) tAAAACTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCg < 2:1230464‑M2/101‑2 (MQ=255) aaaaCTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgt < 1:309065‑M2/101‑3 (MQ=255) aaaCTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgta < 2:349750‑M2/101‑4 (MQ=255) aaCTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtag > 1:1219410‑M2/1‑97 (MQ=255) cTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggc < 1:1715707‑M2/101‑7 (MQ=255) tttATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggcc > 1:1548437‑M2/1‑94 (MQ=255) ttATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccg > 1:588680‑M2/1‑93 (MQ=255) ttCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggat > 2:66726‑M2/1‑90 (MQ=255) ttCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGACTACAAATAGTCCGAACCgtaggccggat < 2:1371020‑M2/101‑12 (MQ=255) aGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataag < 1:906326‑M2/101‑15 (MQ=255) tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggc < 2:492031‑M2/101‑17 (MQ=255) tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgcaggccggataaggc < 2:1636868‑M2/101‑17 (MQ=255) cATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtt > 1:795309‑M2/1‑82 (MQ=255) aTTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgttt > 1:1007434‑M2/1‑81 (MQ=255) aTTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgttt < 2:249714‑M2/101‑21 (MQ=255) tttAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgttta > 2:598596‑M2/1‑80 (MQ=255) ttAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttac > 2:642295‑M2/1‑79 (MQ=255) ttAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttac > 1:818953‑M2/1‑79 (MQ=255) ttAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttac < 1:146074‑M2/101‑23 (MQ=255) ttAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttac > 1:26749‑M2/1‑79 (MQ=255) aGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgc < 2:374024‑M2/101‑25 (MQ=255) cTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgca < 2:98148‑M2/101‑29 (MQ=255) tGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatcc > 1:446759‑M2/1‑70 (MQ=255) aCGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccgg < 1:1679740‑M2/101‑34 (MQ=255) aCGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccgg > 2:298185‑M2/1‑68 (MQ=255) cGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggc < 2:1004028‑M2/101‑35 (MQ=255) gTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggca < 2:703472‑M2/101‑36 (MQ=255) gTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggca < 2:89722‑M2/101‑36 (MQ=255) tCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaatt > 1:1595595‑M2/1‑63 (MQ=255) tGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattgg < 1:281561‑M2/101‑41 (MQ=255) aaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcac < 1:550090‑M2/101‑46 (MQ=255) ccATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacga < 2:551496‑M2/101‑48 (MQ=255) cATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgat > 2:494309‑M2/1‑53 (MQ=255) aTGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatg < 2:829849‑M2/101‑50 (MQ=255) gCCCGATGCGACGCTGTCGCGTCTTATCGTGACTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcc > 1:1371026‑M2/1‑50 (MQ=255) aTGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatg > 2:716730‑M2/1‑45 (MQ=255) aTGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatg < 2:775879‑M2/101‑57 (MQ=255) gACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgac > 1:402552‑M2/1‑41 (MQ=255) gACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgac < 2:846846‑M2/101‑61 (MQ=255) aCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacg > 1:1441705‑M2/1‑40 (MQ=255) gCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgct > 1:525914‑M2/1‑38 (MQ=255) tGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctgg > 1:401935‑M2/1‑36 (MQ=255) tGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctgg > 2:840296‑M2/1‑36 (MQ=255) cgcgTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgc < 2:1306279‑M2/101‑69 (MQ=255) gcgTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcg < 1:654041‑M2/101‑70 (MQ=255) cgTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgt < 2:743243‑M2/101‑71 (MQ=255) gTCTTATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtc < 2:923826‑M2/101‑72 (MQ=255) ttATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtctta > 2:356518‑M2/1‑27 (MQ=255) tATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttat > 1:349750‑M2/1‑26 (MQ=255) tATCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttat < 2:1476143‑M2/101‑76 (MQ=255) aTCGTGCCTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatc < 1:755890‑M2/101‑77 (MQ=255) gCCGACAAATACTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcc > 2:70843‑M2/1‑20 (MQ=255) ccTACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcct < 1:1652314‑M2/101‑83 (MQ=255) tACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctac > 1:342984‑M2/1‑17 (MQ=255) tACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctac > 1:1297477‑M2/1‑17 (MQ=255) tACAAATAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctac > 1:98148‑M2/1‑17 (MQ=255) aaaTAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacatt < 2:599209‑M2/101‑88 (MQ=255) aaTAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacattg < 2:1135683‑M2/101‑89 (MQ=255) tAGTCCGAACCgtaggccggataaggcgtttacgccgcatccggcaattggtgcacgatgcctgatgcgacgctggcgcgtcttatcaggcctacattggt < 2:1324109‑M2/101‑91 (MQ=255) | CTAAAACTTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 27/38941‑39041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |