New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 150 | 3637 = | 23 (0.350) | 38 (0.760) +GGCGTAAACGCCTTATCCGGCCTAC |
29/150 | 0.7 | 81.5% | intergenic (–/–) | –/– | –/– |
? | 27 | = 39041 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
AGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATGGTGCACCGATTGCCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 150/3702‑3637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA < 27/39041‑38942 ||||||||||||||||||||||||| accaaTGTAGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTA < 2:1324109/96‑1 caaTGTAGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATT < 2:1135683/98‑1 aaTGTAGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTT < 2:599209/99‑1 GTAGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTA > 1:98148/1‑101 GTAGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTA > 1:1297477/1‑101 GTAGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTA > 1:342984/1‑101 AGGCCTGATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGG < 1:1652314/101‑1 GGCCTGATAAGACGCGCC‑AGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGAGTATTTGTCGGC > 2:70843/1‑101 GATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGAT < 1:755890/101‑1 ATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATA < 2:1476143/101‑1 ATAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATA > 1:349750/1‑101 TAAGACGCG‑CCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAA > 2:356518/1‑101 GACGCGCC‑AGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGAC < 2:923826/101‑1 acgcgccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACG < 2:743243/94‑1 cgcgccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGC < 1:654041/95‑1 gcgccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCG < 2:1306279/96‑1 ccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACA > 1:401935/3‑101 ccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACA > 2:840296/3‑101 AGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGC > 1:525914/1‑101 CGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGT > 1:1441705/1‑101 GTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTC < 2:846846/101‑1 GTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTC > 1:402552/1‑101 CATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCAT > 2:716730/1‑101 CATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCAT < 2:775879/101‑1 GGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGTCACGATAAGACGCGACAGCGTCGCATCGGGC > 1:1371026/1‑101 CATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCAT < 2:829849/101‑1 atcGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATG > 2:494309/4‑101 tcGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGG < 2:551496/99‑1 GTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTT < 1:550090/101‑1 ccaATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCA < 1:281561/98‑1 aATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGA > 1:1595595/2‑101 TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATAC < 2:703472/101‑1 TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATAC < 2:89722/101‑1 GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACG < 2:1004028/101‑1 CCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGT < 1:1679740/101‑1 CCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGT > 2:298185/1‑101 GGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCA > 1:446759/1‑101 TGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAG < 2:98148/101‑1 GCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCT < 2:374024/101‑1 GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA > 2:642295/1‑101 GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA < 1:146074/101‑1 GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA > 1:26749/1‑101 GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA > 1:818953/1‑101 TAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAA > 2:598596/1‑101 AAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAAT > 1:1007434/1‑101 AAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAAT < 2:249714/101‑1 AACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATG > 1:795309/1‑101 GCCTTATCCGGCCTGCGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCA < 2:1636868/101‑1 GCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCA < 2:492031/101‑1 CTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACT < 1:906326/101‑1 ATCCGGCCTACGGTTCGGACTATTTGTAGTCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAA < 2:1371020/101‑1 ATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAA > 2:66726/1‑101 CGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAA > 1:588680/1‑101 GGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAA > 1:1548437/1‑101 GCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAG < 1:1715707/101‑1 CTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTT > 1:1219410/1‑101 TACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTT < 2:349750/101‑1 ACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTT < 1:309065/101‑1 CGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA > 2:1428109/1‑101 CGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA < 2:1230464/101‑1 ||||||||||||||||||||||||| AGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATGGTGCACCGATTGCCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 150/3702‑3637 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA < 27/39041‑38942 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |