New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 150 3637 =23 (0.350)38 (0.760)
+GGCGTAAACGCCTTATCCGGCCTAC
29/150 0.7 81.5% intergenic (–/–) –/– –/–
?27 = 39041 0 (0.000)intergenic (–/–) –/– –/–

AGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATGGTGCACCGATTGCCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  150/3702‑3637
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA  <  27/39041‑38942
                                                                  |||||||||||||||||||||||||                                                                                                    
accaaTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTA                                                                                           <  2:1324109/96‑1
  caaTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATT                                                                                         <  2:1135683/98‑1
   aaTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTT                                                                                        <  2:599209/99‑1
      GTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTA                                                                                     >  1:98148/1‑101
      GTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTA                                                                                     >  1:1297477/1‑101
      GTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTA                                                                                     >  1:342984/1‑101
        AGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGG                                                                                   <  1:1652314/101‑1
         GGCCTGATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGAGTATTTGTCGGC                                                                                  >  2:70843/1‑101
              GATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGAT                                                                             <  1:755890/101‑1
               ATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATA                                                                            <  2:1476143/101‑1
               ATAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATA                                                                            >  1:349750/1‑101
                TAAGACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAA                                                                           >  2:356518/1‑101
                   GACGCGCCAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGAC                                                                        <  2:923826/101‑1
                     acgcgccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACG                                                                       <  2:743243/94‑1
                      cgcgccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGC                                                                      <  1:654041/95‑1
                       gcgccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCG                                                                     <  2:1306279/96‑1
                          ccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACA                                                                  >  1:401935/3‑101
                          ccAGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACA                                                                  >  2:840296/3‑101
                            AGCGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGC                                                                >  1:525914/1‑101
                              CGTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGT                                                              >  1:1441705/1‑101
                               GTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTC                                                             <  2:846846/101‑1
                               GTCGCATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTC                                                             >  1:402552/1‑101
                                   CATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCAT                                                         >  2:716730/1‑101
                                   CATCAGGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCAT                                                         <  2:775879/101‑1
                                        GGCATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGTCACGATAAGACGCGACAGCGTCGCATCGGGC                                                    >  1:1371026/1‑101
                                          CATCGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCAT                                                  <  2:829849/101‑1
                                           atcGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATG                                                 >  2:494309/4‑101
                                            tcGTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGG                                                <  2:551496/99‑1
                                              GTGCACCAATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTT                                              <  1:550090/101‑1
                                                   ccaATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCA                                         <  1:281561/98‑1
                                                     aATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGA                                       >  1:1595595/2‑101
                                                        TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATAC                                    <  2:703472/101‑1
                                                        TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATAC                                    <  2:89722/101‑1
                                                         GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACG                                   <  2:1004028/101‑1
                                                          CCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGT                                  <  1:1679740/101‑1
                                                          CCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGT                                  >  2:298185/1‑101
                                                            GGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCA                                >  1:446759/1‑101
                                                               TGCGGCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAG                             <  2:98148/101‑1
                                                                   GCGTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCT                         <  2:374024/101‑1
                                                                     GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA                       >  2:642295/1‑101
                                                                     GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA                       <  1:146074/101‑1
                                                                     GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA                       >  1:26749/1‑101
                                                                     GTAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAA                       >  1:818953/1‑101
                                                                      TAAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAA                      >  2:598596/1‑101
                                                                       AAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAAT                     >  1:1007434/1‑101
                                                                       AAACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAAT                     <  2:249714/101‑1
                                                                        AACGCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATG                    >  1:795309/1‑101
                                                                           GCCTTATCCGGCCTGCGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCA                 <  2:1636868/101‑1
                                                                           GCCTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCA                 <  2:492031/101‑1
                                                                             CTTATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACT               <  1:906326/101‑1
                                                                                ATCCGGCCTACGGTTCGGACTATTTGTAGTCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAA            <  2:1371020/101‑1
                                                                                ATCCGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAA            >  2:66726/1‑101
                                                                                   CGGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAA         >  1:588680/1‑101
                                                                                    GGCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAA        >  1:1548437/1‑101
                                                                                     GCCTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAG       <  1:1715707/101‑1
                                                                                       CTACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTT     >  1:1219410/1‑101
                                                                                        TACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTT    <  2:349750/101‑1
                                                                                         ACGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTT   <  1:309065/101‑1
                                                                                          CGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA  >  2:1428109/1‑101
                                                                                          CGGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA  <  2:1230464/101‑1
                                                                  |||||||||||||||||||||||||                                                                                                    
AGACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCATGGTGCACCGATTGCCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  150/3702‑3637
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTTCGGACTATTTGTAGGCACGATAAGACGCGACAGCGTCGCATCGGGCATGGTTTGCCAGATACGTCATAGATCTAAATGCCACTGAATAAAGTTTTA  <  27/39041‑38942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.