| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 145 | = 10378 | 0 (0.000) | 15 (0.340) +GGCGTGAACGCCTTATCCGACCTACGGTTCGGT |
12/134 | 2.9 | 45.3% | intergenic (–/–) | –/– | –/– |
| ? | 79 | = 10783 | 54 (0.810) | intergenic (–/–) | –/– | –/– | |||||
TGCACGACCCGTAGGCCGGATAAGGCACTCGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGC > 79/10694‑10881 | cttgccgaatgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGAc > 1:1355919/11‑101 (MQ=14) ttgccgaatgTAGGCCGGATAAGACGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACt < 2:742031/92‑1 (MQ=14) aatgTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATc > 1:833776/4‑101 (MQ=14) gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCggg < 1:1023873/101‑1 (MQ=17) aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCa < 2:588342/101‑1 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAt < 2:1423923/101‑1 (MQ=18) ccGGATAAGGCGTTTACGCCGCATCGGGCAATCAATGCCTGATGCGACGCTGTCGCTTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAtt < 1:1241256/101‑1 (MQ=18) ccGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAtt < 2:1657262/101‑1 (MQ=18) ccGGATAAGGCGTTTACGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAAtt < 1:1102608/101‑1 (MQ=18) ggcgtttacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTa < 1:1640944/92‑1 (MQ=255) ggcgtttacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTa < 1:1005908/92‑1 (MQ=255) gcggttaggCCGCATCCGTCAAGCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTAc < 1:1580976/93‑1 (MQ=25) cgtttacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACg < 2:293738/94‑1 (MQ=255) gtttacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGa > 2:1067989/7‑101 (MQ=255) gtttacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGa > 1:718782/7‑101 (MQ=255) ttacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATg < 2:648895/97‑1 (MQ=255) tacgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCCTTACCGACTCGCATCGGGCAATTGTGGGTTACGATgg < 2:324018/98‑1 (MQ=255) cgCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCa > 2:719641/2‑101 (MQ=255) gCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCAt > 2:648027/1‑101 (MQ=255) ccGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATc > 2:596447/1‑101 (MQ=255) cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcg < 2:660340/101‑1 (MQ=255) cGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcg < 1:1643363/101‑1 (MQ=255) cATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATcgcg > 1:325010/1‑101 (MQ=255) aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGa > 2:790551/1‑101 (MQ=255) aTCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGa > 1:2336/1‑101 (MQ=255) ggCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGc > 1:732209/1‑101 (MQ=255) caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCt > 1:1704221/1‑101 (MQ=255) caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCt < 1:1141869/101‑1 (MQ=255) caatcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCt < 1:1636954/101‑1 (MQ=255) tcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCt < 1:306777/101‑1 (MQ=255) tcaatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGAAGGCATCGCGATAGCCTGCt < 1:972906/101‑1 (MQ=255) caatGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCtt < 2:527623/101‑1 (MQ=255) gCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTctct > 2:988652/1‑101 (MQ=255) ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCtt > 2:1224455/1‑101 (MQ=255) ccTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCtt > 2:1117804/1‑101 (MQ=255) tGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCa > 1:880147/1‑101 (MQ=255) aTGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAag > 2:720083/1‑101 (MQ=255) cGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAagcag > 2:940548/1‑101 (MQ=255) gACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGATACGATGGCATCGCGATAGCCTGCTTCTCTTCAagcacc > 1:546811/1‑99 (MQ=255) tGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTtctc < 2:551248/101‑1 (MQ=255) gcgTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACt > 1:413300/1‑101 (MQ=255) gTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTAc > 2:1374253/1‑101 (MQ=255) tCTTATCAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgat > 1:996353‑M2/1‑18 (MQ=255) tCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACg < 2:1124571/101‑1 (MQ=255) tCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACg > 2:936850/1‑101 (MQ=255) cTTATCAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatc > 1:1336749‑M2/1‑17 (MQ=255) tATCAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccg > 2:665718‑M2/1‑15 (MQ=255) tATCAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccg > 1:1279494‑M2/1‑15 (MQ=255) tATCAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccg < 2:1483703‑M2/101‑87 (MQ=255) aTCAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgc < 1:1171808‑M2/101‑88 (MQ=255) aTCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCGTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAg > 2:1410264/1‑101 (MQ=255) aTCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAg < 2:1355913/101‑1 (MQ=255) cAGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcga < 1:1493557‑M2/101‑90 (MQ=255) cAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGa > 2:503024/1‑101 (MQ=255) cAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGa > 2:253822/1‑101 (MQ=255) aGGCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaa > 1:99320‑M2/1‑11 (MQ=255) aGGCATACAAAaccgaaccgtagggcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaa > 2:72284‑M2/1‑11 (MQ=255) ggCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacatcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaag > 2:345377‑M2/1‑10 (MQ=255) gCCTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaagc > 1:281748‑M2/1‑9 (MQ=255) ccTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaagcg > 2:279358‑M2/1‑8 (MQ=255) ccTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaagcg < 2:1708123‑M2/101‑94 (MQ=255) ccTACAAAaccgaaccgtaggtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgaagcg > 1:504790‑M2/1‑8 (MQ=255) cTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGc > 1:1290934/1‑101 (MQ=255) tACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCa > 2:1010667/1‑101 (MQ=255) aCAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCaa > 1:1003244/1‑101 (MQ=255) cAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAg < 1:1067994/101‑1 (MQ=255) cAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAg < 1:1189019/101‑1 (MQ=255) aaaaccgaaccgtacgtcggataaggcgttcacgccgcatccgacaaacagcgcctgatgcgacgtttacacccgtccgtagcgatccgcgacccgcacca < 2:881029‑M2/101‑99 (MQ=255) aaaCCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGATTCTCGACTACGCCAGGATCGGCAAGc < 2:577341/101‑1 (MQ=255) | TGCACGACCCGTAGGCCGGATAAGGCACTCGTGCCGCATCCGGCAATCAATGCCTGATGCGACGCTGTCGCGTCTTATCAGGCCTACAAACCGTTACCGACTCGCATCGGGCAATTGTGGGTTACGATGGCATCGCGATAGCCTGCTTCTCTTCAAGCAGCTTCTCGACTACGCCAGGATCGGCAAGC > 79/10694‑10881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |