| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 145 | = 10378 | 0 (0.000) | 15 (0.340) +GGCGTGAACGCCTTATCCGACCTACGGTTCGGT |
12/134 | 2.9 | 45.3% | intergenic (–/–) | –/– | –/– |
| ? | 79 | = 10783 | 54 (0.810) | intergenic (–/–) | –/– | –/– | |||||
GTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 145/10280‑10378 | gTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCgg < 1:207403‑M1/101‑3 (MQ=255)gTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCgg > 1:7702‑M1/1‑99 (MQ=255) gCGGGCCGGCTCTTATGTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGCCGGGTTTAAACGTCCCATCAGGCGCTGTTTGTCGGATGCggcg < 2:1322742‑M1/101‑5 (MQ=255) cGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgt > 1:1325342‑M1/1‑96 (MQ=255) ggTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtg > 2:1606724‑M1/1‑95 (MQ=255) ggTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtg < 2:1622747‑M1/101‑7 (MQ=255) ccGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaac > 1:323182‑M1/1‑92 (MQ=255) ccGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaac < 1:184044‑M1/101‑10 (MQ=255) cGGCTCTTATCTCGAAGAGGTTGATGGGGGGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCCGACGCggcgggaacg > 2:813653‑M1/1‑91 (MQ=255) cGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGAGTAAAAGTCGCGTCAGCCGCTGTTTGTCGGATGCggcgtgaacg > 2:638796‑M1/1‑91 (MQ=255) ggCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgc > 2:1178490‑M1/1‑90 (MQ=255) gCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgcc > 1:1331027‑M1/1‑89 (MQ=255) ctctTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATTGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgcct > 2:1372837‑M1/1‑88 (MQ=255) tctTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgcctt > 2:614050‑M1/1‑87 (MQ=255) ctTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgcctta > 1:920618‑M1/1‑86 (MQ=255) tATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatc > 1:176768‑M1/1‑84 (MQ=255) aTCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatcc > 1:179888‑M1/1‑83 (MQ=255) aTCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGGAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatcc > 1:1416123‑M1/1‑83 (MQ=255) tctcGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccg < 2:1098481‑M1/101‑20 (MQ=255) ctcGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccga > 2:361162‑M1/1‑81 (MQ=255) gAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacct > 1:418506‑M1/1‑78 (MQ=255) aaGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgaccta > 1:1217275‑M1/1‑77 (MQ=255) aaGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgaccta > 1:595794‑M1/1‑77 (MQ=255) gagGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacg > 2:488674‑M1/1‑75 (MQ=255) atgatgTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttc > 2:1533968‑M1/1‑71 (MQ=255) tgatgTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcg < 1:79999‑M1/101‑32 (MQ=255) tgatgTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcg < 1:112039‑M1/101‑32 (MQ=255) tggtgCGGGTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacgtacggttcggtttt < 2:881029‑M1/101‑37 (MQ=255) cgcTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtagg > 1:504790‑M1/1‑60 (MQ=255) cgcTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtagg < 2:1708123‑M1/101‑42 (MQ=255) cgcTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtagg > 2:279358‑M1/1‑60 (MQ=255) gcTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggc > 1:281748‑M1/1‑59 (MQ=255) cTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGATGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcc > 2:345377‑M1/1‑58 (MQ=255) ttCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgccctacggttcggttttgtatgcct > 2:72284‑M1/1‑57 (MQ=255) ttCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcct > 1:99320‑M1/1‑57 (MQ=255) tCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctg < 1:1493557‑M1/101‑46 (MQ=255) gcgGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgat < 1:1171808‑M1/101‑48 (MQ=255) cgGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgata > 1:1279494‑M1/1‑53 (MQ=255) cgGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgata > 2:665718‑M1/1‑53 (MQ=255) cgGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgata < 2:1483703‑M1/101‑49 (MQ=255) gATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataag > 1:1336749‑M1/1‑51 (MQ=255) aTCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataaga > 1:996353‑M1/1‑50 (MQ=255) gacggGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagc < 1:279358‑M1/101‑61 (MQ=255) gggTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtc > 2:726715‑M1/1‑38 (MQ=255) ggTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcg > 2:902025‑M1/1‑37 (MQ=255) ggTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcg > 2:1461799‑M1/1‑37 (MQ=255) tgtAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgca > 2:24721‑M1/1‑35 (MQ=255) gtAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcat > 2:1153305‑M1/1‑34 (MQ=255) tAAACGTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatc < 1:510285‑M1/101‑69 (MQ=255) gTCGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggca > 1:1443765‑M1/1‑28 (MQ=255) cGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctccggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaat < 1:1710441‑M1/101‑76 (MQ=255) cGCATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaat < 1:1071827‑M1/101‑76 (MQ=255) cATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatga > 2:1396926‑M1/1‑24 (MQ=255) cATCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatga < 1:875809‑M1/101‑78 (MQ=255) aTCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaa > 2:1548513‑M1/1‑23 (MQ=255) tCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaat < 2:996348‑M1/101‑80 (MQ=255) tCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaat < 1:24721‑M1/101‑80 (MQ=255) tCAGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaat < 1:446573‑M1/101‑80 (MQ=255) aGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaatgc > 1:79452‑M1/1‑20 (MQ=255) aGGCGCTGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaatgc > 1:1644218‑M1/1‑20 (MQ=255) tGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaatgcgaaacc < 2:449383‑M1/101‑88 (MQ=255) tGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaatgcgaaacc < 2:99320‑M1/101‑88 (MQ=255) tGTTTGTCGGATGCggcgtgaacgccttatccgacctacggttcggttttgtaggcctgataagacgcggcagcgtcgcatcaggcaatgaatgcgaaacc < 2:439713‑M1/101‑88 (MQ=255) | GTGCGGTCCGGCTCTTATCTCGAAGAGGATGATGTGGTGCGCTTCGCGGATCGCTACGGACGGGTGTAAACGTCGCATCAGGCGCTGTTTGTCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 145/10280‑10378 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |