| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 106 | = 15781 | 0 (0.000) | 53 (0.970) +GATACACGGATGGTCAGC |
46/164 | 0.1 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 37 | = 32985 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CACGAAGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 37/32888‑32985 | cacGAAGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgct > 1:317496‑M2/1‑98 (MQ=255) aaGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgacc < 2:1414707‑M2/101‑8 (MQ=255) aaGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgacc < 2:1415731‑M2/101‑8 (MQ=255) gCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccat > 2:1646662‑M2/1‑92 (MQ=255) atccatcGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatcc < 1:47882‑M2/101‑12 (MQ=255) atccatcGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatcc > 2:1533409‑M2/1‑90 (MQ=255) tccatcGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccg < 2:1110151‑M2/101‑13 (MQ=255) tccatcGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccg < 2:1436469‑M2/101‑13 (MQ=255) atcGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgt < 1:479796‑M2/101‑16 (MQ=255) atcGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgt < 1:1641413‑M2/101‑16 (MQ=255) cGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtat > 2:1216479‑M2/1‑84 (MQ=255) cGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtat > 2:755365‑M2/1‑84 (MQ=255) tggtCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggct > 2:752238‑M2/1‑78 (MQ=255) tggtCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggct > 2:263565‑M2/1‑78 (MQ=255) ggtCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggcta < 2:594764‑M2/101‑25 (MQ=255) aCCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagta > 2:581298‑M2/1‑70 (MQ=255) aCCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagta > 1:660468‑M2/1‑70 (MQ=255) ccTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtac > 1:20546‑M2/1‑69 (MQ=255) cTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacg < 2:256531‑M2/101‑34 (MQ=255) gAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtt < 1:1088035‑M2/101‑36 (MQ=255) gAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtt < 2:260750‑M2/101‑36 (MQ=255) aCGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttc > 1:1251477‑M2/1‑64 (MQ=255) aCGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttc < 2:1675460‑M2/101‑38 (MQ=255) tAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaact > 1:842526‑M2/1‑60 (MQ=255) tAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaact > 1:692958‑M2/1‑60 (MQ=255) aaCGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactc > 1:1709296‑M2/1‑59 (MQ=255) gTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgct < 1:885002‑M2/101‑46 (MQ=255) tgatgaACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctg > 1:49424‑M2/1‑55 (MQ=255) gatgaACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctga < 1:1299140‑M2/101‑48 (MQ=255) atgaACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgac < 2:1028877‑M2/101‑49 (MQ=255) tgaACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgact > 2:1274536‑M2/1‑52 (MQ=255) tGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaac < 1:1110159‑M2/101‑57 (MQ=255) gAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaaca > 1:671988‑M2/1‑44 (MQ=255) aaaTGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacag < 2:396647‑M2/101‑59 (MQ=255) aaTGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagc > 2:1088030‑M2/1‑42 (MQ=255) tgctgcACGCCGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccctccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcag > 1:237456‑M2/1‑40 (MQ=255) tgctCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcag > 2:1066675‑M2/1‑37 (MQ=255) tgctCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcag < 2:1695922‑M2/101‑65 (MQ=255) ctCGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcagga > 1:1621457‑M2/1‑35 (MQ=255) cGACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacg > 2:1299134‑M2/1‑33 (MQ=255) gACGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgt < 1:769803‑M2/101‑70 (MQ=255) aCGCGATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgtt > 2:925067‑M2/1‑31 (MQ=255) gcgATGTAACACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttat > 2:1201862‑M2/1‑29 (MQ=255) ccgaTGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttat > 1:1621424‑M2/2‑29 (MQ=255) cgATGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttatt < 1:171522‑M2/101‑74 (MQ=255) aTGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattac > 2:394080‑M2/1‑26 (MQ=255) tGGAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattact > 2:204508‑M2/1‑25 (MQ=255) ggAAATCCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactc > 1:442843‑M2/1‑24 (MQ=255) gAAAACCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcg > 2:1003638‑M2/1‑23 (MQ=255) aaaaCCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgt > 1:630541‑M2/1‑22 (MQ=255) aaaCCCGGGAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgta < 1:1055873‑M2/101‑81 (MQ=255) aaCCCGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtac > 2:1661581‑M2/1‑20 (MQ=255) ccGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtacctt > 1:1093112‑M2/1‑17 (MQ=255) cGGAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttc < 1:1093246‑M2/101‑86 (MQ=255) ggAAAAATATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttca > 1:705623‑M2/1‑15 (MQ=255) aaTATCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaa > 1:577725‑M2/1‑10 (MQ=255) atCCGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatct > 2:1654659‑M2/1‑7 (MQ=255) ccGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatctat > 2:1682930‑M2/1‑5 (MQ=255) ccGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatctat > 1:1474017‑M2/1‑5 (MQ=255) ccGCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacggtattactcgtaccttcactcaatctat < 1:1111636‑M2/101‑97 (MQ=255) gCAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatctatgt < 1:432299‑M2/101‑99 (MQ=255) gagctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatctatgta > 2:1086151‑M2/2‑2 (MQ=255) cAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatctatgta > 1:782118‑M2/1‑2 (MQ=255) cAgctgaccatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattactcgtaccttcactcaatctatgta < 2:180314‑M2/101‑100 (MQ=255) agctgagcatccgtgtatctggctacgcagtacgtttcaactcgctgactaaagaacagcagcaggacgttattcctcgtaccttccctcaatctatgtaa > 1:849413‑M2/1‑1 (MQ=255) | CACGAAGCATCCATCGAAGGTGGTCAGCACCTGAACGTTAACGTGATGAACCGTGAAATGCTGCTCGACGCGATGGAAAACCCGGAAAAATATCCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 37/32888‑32985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |