New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 10 1 =0 (0.000)23 (0.360) 16/194 3.3 100% intergenic (–/–) –/– –/–
?4 = 78064 0 (0.000)intergenic (–/–) –/– –/–
Rejected: Coverage evenness skew score above cutoff.

GTTCCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC‑‑‑‑‑‑‑  >  4/77964‑78067
                                                                                                    |          
gTTCCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTa            <  1:1131157/101‑1 (MQ=255)
   nccGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGc         >  1:840977/2‑101 (MQ=255)
   cccGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGc         <  2:454367/101‑1 (MQ=255)
      gCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGccgg      <  1:948564/101‑4 (MQ=255)
      gCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGccgg      <  2:980743/101‑4 (MQ=255)
      gCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGccgg      >  1:318736/1‑98 (MQ=255)
        acacCGCGCACTATGAAGTGGTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGccggat    <  2:207004/101‑6 (MQ=255)
          acCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGccggatgc  <  2:1210656/101‑8 (MQ=255)
                                                                                                    |          
GTTCCCGCACACCGCGCACTATGAAGTGCTGACGCTGCTGGTGAAGCAATAAAAAAGCCGCAGGTGCGGCTTCAGATTGCTGACAAAGTGCGCGTTGTTTATGC‑‑‑‑‑‑‑  >  4/77964‑78067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.