New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 1 = | 0 (0.000) | 23 (0.360) | 16/194 | 3.3 | 100% | intergenic (–/–) | –/– | –/– |
? | 4 | = 78064 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
Rejected: Coverage evenness skew score above cutoff. |
ATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 10/67‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaTAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGCGGG < 4/78064‑77967 gcccaTGCAATGTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCC > 1:1049480/6‑101 aTGCAATGTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCAC > 1:495786/2‑101 aTGCAATGTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCAC > 1:140953/2‑101 TGCAATGTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACC > 1:1204032/1‑101 GCAATGTATTGAATTTGCACTCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCT < 2:21482/101‑1 GCAATGTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCT < 1:1057553/101‑1 AATGTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGC > 1:1387571/1‑101 atgTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCG > 1:678291/4‑101 tgTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGG < 1:942741/99‑1 gTATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGC > 1:1720371/2‑101 TATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCT > 2:745325/1‑101 ATTGAATTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTT > 2:607912/1‑101 GAATTTGCACGCTTGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCCCTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTT < 2:704947/101‑1 TTTGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTAT < 2:1049475/101‑1 TGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTG < 2:1360440/101‑1 TGCACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTG > 2:1608001/1‑101 ACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTT < 2:390913/101‑1 ACGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTT > 2:969952/1‑101 GCATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGT > 2:1210656/1‑101 ATCCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCACCACTTCATAGTGCGCGGTGT > 2:207004/1‑101 CCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGC > 1:948564/1‑101 CCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGC < 1:318736/101‑1 CCGGCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGC > 2:980743/1‑101 GCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGCGGn < 1:840977/101‑2 GCATAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGCGGG > 2:454367/1‑101 ATGATTGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 10/67‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaTAAACAACGCGCACTTTGTCAGCAATCTGAAGCCGCACCTGCGGCTTTTTTATTGCTTCACCAGCAGCGTCAGCACTTCATAGTGCGCGGTGTGCGGG < 4/78064‑77967 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |