New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 63 1 =0 (0.000)38 (0.590)
+CACG
32/192 1.0 100% intergenic (–/–) –/– –/–
?8 1 = 0 (0.000)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCGATGGATGC  >  63/1‑100
                                                                                                |                                                                                                   
aaagattttatcgggcgtcggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGc                                                                                                 <  1:1240829‑M1/5‑1 (MQ=255)
 aagattttatcgggcgtcggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCt                                                                                                >  1:542023‑M1/96‑101 (MQ=255)
  agattttatcgggcgtcggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTg                                                                                               >  2:1021119‑M1/95‑101 (MQ=255)
    attttatcgggcgtcggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgcgTCCgccgcc                                                                                             <  1:1317879‑M1/9‑1 (MQ=255)
          tcgggcgtcggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcctgTCCcctgccgccccc                                                                                       <  2:516412‑M1/15‑4 (MQ=255)
               cgtcggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGAca                                                                                  <  2:257538‑M1/20‑1 (MQ=255)
                  cggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGAcagca                                                                               >  1:592507‑M1/79‑101 (MQ=255)
                   ggtgaggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGAcagcag                                                                              >  1:715424‑M1/78‑101 (MQ=255)
                       aggtgaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCg                                                                          >  1:1042897‑M1/74‑101 (MQ=255)
                           gaaaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGacagcagggggcctt                                                                      <  2:414086‑M1/32‑7 (MQ=255)
                             aaatttcgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACtttt                                                                    >  2:47944‑M1/68‑101 (MQ=255)
                                   cgcccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCa                                                              >  2:485692‑M1/62‑101 (MQ=255)
                                     cccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAAc                                                            >  1:1649153‑M1/60‑101 (MQ=255)
                                      ccggacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACa                                                           >  1:1216650‑M1/59‑101 (MQ=255)
                                       cgggcaggcccccgaaagcatcccctgaccgatataaccacggtgcatcggctcgtgTCCGCTGTCGCCACCCGACAGCAGGGCGACTTTGCCTGGAACAg                                                          >  2:1694384‑M1/58‑101 (MQ=255)
                                         gacaggcccccgaaagcatcccctgaccgatataaccacagtgcatcggctcctgTCCGCTGCCGCCACCCCACCGCAGGGCGACTTTTTCTGCaacaagg                                                        <  2:130616‑M1/46‑4 (MQ=255)
                                               cccccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCa                                                  >  1:1520118‑M1/50‑101 (MQ=255)
                                                 cccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGc                                                <  1:500922‑M1/54‑1 (MQ=255)
                                                  ccgaaagcatcccctgaccgatataactacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGGGACTTTTCCTGCCACAGGGGCATCAGCt                                               <  2:895409‑M1/55‑1 (MQ=255)
                                                  ccgaaagcatcccctgaccgatataaccacagtgcatcggctcgtgTTCGCTGCCGCCCCCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCt                                               <  1:1192054‑M1/55‑1 (MQ=255)
                                                    gaaagcatcccctgaccgatataaccacagtgcatcggctcctgTCCGCTGCCGCCCCCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCg                                             <  2:973599‑M1/57‑1 (MQ=255)
                                                      aagcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCggg                                           <  1:1006412‑M1/59‑1 (MQ=255)
                                                       agcatcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGt                                          >  1:643349‑M1/42‑101 (MQ=255)
                                                          atcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGAc                                       <  1:1355847‑M1/63‑1 (MQ=255)
                                                          atcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCCACAGCAGGGCGACTTTTCCTGCAACAGGGGCatcagctccggggaa                                       <  2:1294905‑M1/63‑8 (MQ=255)
                                                          atcccctgaccgatataaccacagtgcatcggctcgtgTCCGCTGACGCCACCCCACAGCAGGGCGACTTTTCCCGTAACAGGGGCATCAGCTCGGGCGAc                                       <  2:1098198‑M1/63‑1 (MQ=255)
                                                              cctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATac                                   >  1:466022‑M1/35‑101 (MQ=255)
                                                               ctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGCCAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGGGACATaca                                  <  1:924591‑M1/68‑1 (MQ=255)
                                                               ctgaccgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATaca                                  >  1:548174‑M1/34‑101 (MQ=255)
                                                                    cgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATacacccga                             <  1:1485327‑M1/73‑4 (MQ=255)
                                                                    cgatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGa                             <  1:519811‑M1/73‑1 (MQ=255)
                                                                     gatataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGAt                            >  2:433760‑M1/28‑101 (MQ=255)
                                                                       tataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATcc                          >  1:484234‑M1/26‑101 (MQ=255)
                                                                        ataaccacagtgcatcggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCt                         >  1:1009113‑M1/25‑101 (MQ=255)
                                                                                        ggctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCga         <  1:565976‑M1/93‑1 (MQ=255)
                                                                                         gctcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCgat        >  1:895414‑M1/8‑101 (MQ=255)
                                                                                           tcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCgatgg      >  1:1020499‑M1/6‑101 (MQ=255)
                                                                                           tcgtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCgatgg      >  2:745144‑M1/6‑101 (MQ=255)
                                                                                             gtgTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCgatggat    <  1:1632792‑M1/98‑1 (MQ=255)
                                                                                               gTCCGCTTCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCGATGGATGc  >  2:483564‑M1/2‑101 (MQ=255)
                                                                                               gTCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCGATGGATGc  >  1:1050037‑M1/2‑101 (MQ=255)
                                                                                                |                                                                                                   
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCCGCTGCCGCCACCCGACAGCAGGGCGACTTTTCCTGCAACAGGGGCATCAGCTCGGGTGACATACACCGGATCCTGATGCAGTGTCAGCGATGGATGC  >  63/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.