| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 63 | 1 = | 0 (0.000) | 38 (0.590) +CACG |
32/192 | 1.0 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 8 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATGCG > 8/1‑99 | ccatcgctgacactgcatcaggatccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacga > 1:1020499‑M2/101‑101 (MQ=255)ccatcgctgacactgcatcaggatccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacga > 2:745144‑M2/101‑101 (MQ=255) atcgctgacactgcatcaggatccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGc > 1:895414‑M2/99‑101 (MQ=255) tcgctgacactgcatcaggatccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGcc < 1:565976‑M2/4‑1 (MQ=255) aggatccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTtat > 1:1009113‑M2/82‑101 (MQ=255) ggatccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTtata > 1:484234‑M2/81‑101 (MQ=255) atccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATc > 2:433760‑M2/79‑101 (MQ=255) tcgggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCg < 1:1485327‑M2/24‑1 (MQ=255) tccggtgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCg < 1:519811‑M2/24‑1 (MQ=255) tgtatgtcccccgagctgatgcccctgttgcaggaaaagtcgccctgctggcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAg < 1:924591‑M2/29‑1 (MQ=255) tgtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAg > 1:548174‑M2/73‑101 (MQ=255) gtatgtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAgg > 1:466022‑M2/72‑101 (MQ=255) ttccccggagctgatgcccctgttgcaggaaaagtcgccctgctgtggggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGAt < 2:1294905‑M2/34‑1 (MQ=255) gtcgcccgagctgatgcccctgttacgggaaaagtcgccctgctgtggggtggcgtcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGAt < 2:1098198‑M2/34‑1 (MQ=255) gtcacccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGAt < 1:1355847‑M2/34‑1 (MQ=255) acccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCt > 1:643349‑M2/65‑101 (MQ=255) cccgagctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCtt < 1:1006412‑M2/38‑1 (MQ=255) cgagctgatgcccctgttgcaggaaaagtcgccctgctgtcggggggcggcagcggacaggAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTc < 2:973599‑M2/40‑1 (MQ=255) agctgatgcccctgttgcaggaaaagtcgccctgctgtcggggggcggcagcgaacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCgg < 1:1192054‑M2/42‑1 (MQ=255) agctgatgcccctgtggcaggaaaagtccccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTAGTTATATCGGTCAGGGGATGCTTTCgg < 2:895409‑M2/42‑1 (MQ=255) gctgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCggg < 1:500922‑M2/43‑1 (MQ=255) tgatgcccctgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCggggg > 1:1520118‑M2/57‑101 (MQ=255) ccttgttgcagaaaaagtcgccctgcggtggggtggcggcagcggacaggAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTc < 2:130616‑M2/51‑1 (MQ=255) ctgttccaggcaaagtcgccctgctgtcgggtggcgacagcggacacgAGCCGATGCACCGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGCCCg > 2:1694384‑M2/49‑101 (MQ=255) tgttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCgg > 1:1216650‑M2/48‑101 (MQ=255) gttgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCggg > 1:1649153‑M2/47‑101 (MQ=255) tgcaggaaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCg > 2:485692‑M2/45‑101 (MQ=255) aaaagtcgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAAttt > 2:47944‑M2/39‑101 (MQ=255) aaggccccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTtc < 2:414086‑M2/65‑1 (MQ=255) cgccctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTtcacct > 1:1042897‑M2/33‑101 (MQ=255) ctgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTtcacctcacc > 1:715424‑M2/29‑101 (MQ=255) tgctgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCg > 1:592507‑M2/28‑101 (MQ=255) tgtcgggtggcggcagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACg < 2:257538‑M2/77‑1 (MQ=255) gggggcggcaggggacaggAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGa < 2:516412‑M2/82‑1 (MQ=255) ggcggcggacgcgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAAt < 1:1317879‑M2/88‑1 (MQ=255) cagcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCt > 2:1021119‑M2/12‑101 (MQ=255) agcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCtt > 1:542023‑M2/11‑101 (MQ=255) gcggacacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCttt < 1:1240829‑M2/92‑1 (MQ=255) cgggAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATg < 2:1240078‑M2/97‑1 (MQ=255) cacgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATg < 2:643344‑M2/97‑1 (MQ=255) cgAGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATgcg > 2:594584‑M2/3‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCCGATGCACTGTGGTTATATCGGTCAGGGGATGCTTTCGGGGGCCTGTCCGGGCGAAATTTTCACCTCACCGACGCCCGATAAAATCTTTGAATGCG > 8/1‑99 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |