| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 200 | 1 = | 0 (0.000) | 26 (0.530) +ATCGTCGGTACTGGCGGTGACGGCAGC |
22/146 | 0.7 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 46 | = 30710 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCACCGCGAATTTTC > 200/1‑100 | gccgtgtttcgccactttcagcccacaggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatat > 1:1466051‑M1/100‑101 (MQ=255) cgccactttcagcccacaggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACa > 1:429285‑M1/91‑101 (MQ=255) cgccactttcagcccacaggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACa < 1:1637392‑M1/11‑1 (MQ=255) tttcagcccacaggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAAt > 1:973068‑M1/85‑101 (MQ=255) tttcagcccacaggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAAt > 2:1462370‑M1/85‑101 (MQ=255) ttcagcccacaggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATc > 2:136073‑M1/84‑101 (MQ=255) caggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCgg > 1:761630‑M1/75‑101 (MQ=255) ggccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGa > 1:548424‑M1/73‑101 (MQ=255) ccgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAAc > 2:96564‑M1/71‑101 (MQ=255) cgcggcgacaaacgcactggcggtagaaatattgattctgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAAcg > 1:1561769‑M1/70‑101 (MQ=255) cgcggcgacaaacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAAcg > 1:1550395‑M1/70‑101 (MQ=255) aacgcactggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGtt < 1:1027185‑M1/42‑1 (MQ=255) ctggcggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAg < 2:1399802‑M1/48‑1 (MQ=255) ggtagaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAgcg < 1:753978‑M1/53‑1 (MQ=255) gaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGt < 2:657400‑M1/57‑1 (MQ=255) gaaatattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGt < 1:1092785‑M1/57‑1 (MQ=255) atattgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTtgc < 1:471365‑M1/60‑1 (MQ=255) ttgatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTtgctgc < 1:305215‑M1/63‑1 (MQ=255) gatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGTGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTc < 2:596956‑M1/65‑1 (MQ=255) gatactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTc < 1:515894‑M1/65‑1 (MQ=255) atactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTcc < 2:650424‑M1/66‑1 (MQ=255) tactgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCg > 2:156765‑M1/35‑101 (MQ=255) actgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCgg < 1:108376‑M1/68‑1 (MQ=255) tgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCg > 2:1237383‑M1/32‑101 (MQ=255) tgttgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCg < 1:13204‑M1/70‑1 (MQ=255) tgctgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGAtc < 2:1362303‑M1/73‑1 (MQ=255) tgccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCg < 2:1492386‑M1/76‑1 (MQ=255) gccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGt < 2:604083‑M1/77‑1 (MQ=255) ccgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGtt > 1:940808‑M1/24‑101 (MQ=255) cgtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTc > 2:471360‑M1/23‑101 (MQ=255) gtcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCg < 1:382094‑M1/80‑1 (MQ=255) tcaccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCgg > 1:505869‑M1/21‑101 (MQ=255) caccgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCggg > 2:1637386‑M1/20‑101 (MQ=255) accgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGt > 2:1287261‑M1/19‑101 (MQ=255) accgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGt > 2:461650‑M1/19‑101 (MQ=255) cgccagtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGc < 2:224347‑M1/85‑1 (MQ=255) agtaccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCAc < 1:326874‑M1/89‑1 (MQ=255) taccgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCACcg > 2:1519028‑M1/11‑101 (MQ=255) accgacgatATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCACcgc < 2:1421107‑M1/92‑1 (MQ=255) atATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCACCGCGAAtttt < 1:1557801‑M1/99‑1 (MQ=255) tATCATCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCACCGCGAATTTTc > 1:1351496‑M1/2‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCGGCGTTTTCCAGTAGCGCGGTTGCTGCTCCGGCGATCTCGTTCGGGTGCTCACCGCGAATTTTC > 200/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |