New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 200 | 1 = | 0 (0.000) | 26 (0.530) +ATCGTCGGTACTGGCGGTGACGGCAGC |
22/146 | 0.7 | 100% | intergenic (–/–) | –/– | –/– |
? | 46 | = 30710 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 46/30610‑30710 | gAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt > 1:284928/1‑101 (MQ=255) aCCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgc < 1:526298‑M2/101‑3 (MQ=255) cAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctg > 2:972267‑M2/1‑97 (MQ=255) tACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtca > 1:1691425‑M2/1‑91 (MQ=255) cTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcacc < 2:282750‑M2/101‑13 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccag < 1:1237388‑M2/101‑18 (MQ=255) aCGCTATGGTTGCCGTGTTTCGCCCCTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagt > 2:1361591‑M2/1‑83 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagta > 2:1131965‑M2/1‑82 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagta < 1:1519034‑M2/101‑20 (MQ=255) gCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtac < 1:1035495‑M2/101‑21 (MQ=255) cGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgac > 1:1288409‑M2/1‑77 (MQ=255) gCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatat > 1:1466051‑M2/1‑72 (MQ=255) cGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaaca > 1:429285‑M2/1‑63 (MQ=255) cGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaaca < 1:1637392‑M2/101‑39 (MQ=255) tttCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataat > 1:973068‑M2/1‑57 (MQ=255) tttCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataat > 2:1462370‑M2/1‑57 (MQ=255) ttCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatc > 2:136073‑M2/1‑56 (MQ=255) caGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgg > 1:761630‑M2/1‑47 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcggga > 1:548424‑M2/1‑45 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaac > 2:96564‑M2/1‑43 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATTCTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacg > 1:1561769‑M2/1‑42 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacg > 1:1550395‑M2/1‑42 (MQ=255) aaCGCACTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgtt < 1:1027185‑M2/101‑70 (MQ=255) cTGGCGGTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccag < 2:1399802‑M2/101‑76 (MQ=255) ggTAGAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcg < 1:753978‑M2/101‑81 (MQ=255) gAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggt < 1:1092785‑M2/101‑85 (MQ=255) gAAATATTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggt < 2:657400‑M2/101‑85 (MQ=255) atatTGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgc < 1:471365‑M2/101‑88 (MQ=255) ttGATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgc < 1:305215‑M2/101‑91 (MQ=255) gATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggtgcgggaacggcgcggcgttttccagtagcgcggttgctgctc < 2:596956‑M2/101‑93 (MQ=255) gATACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctc < 1:515894‑M2/101‑93 (MQ=255) aTACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctcc < 2:650424‑M2/101‑94 (MQ=255) tACTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctccg > 2:156765‑M2/1‑7 (MQ=255) aCTGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctccgg < 1:108376‑M2/101‑96 (MQ=255) tGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctccggcg > 2:1237383‑M2/1‑4 (MQ=255) tGTTgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctccggcg < 1:13204‑M2/101‑98 (MQ=255) tgctgccgtcaccgccagtaccgacgatatcagcaaacagataatccgggcgcgggaacggcgcggcgttttccagtagcgcggttgctgctccggcgatc < 2:1362303‑M2/101‑101 (MQ=255) | GAACCAGATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 46/30610‑30710 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |