New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 146 | = 10176 | 0 (0.000) | 9 (0.150) | 6/186 | 3.2 | 100% | intergenic (–/–) | –/– | –/– |
? | 82 | = 2357 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
Rejected: Coverage evenness skew score above cutoff. |
CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑ > 146/10076‑10176 | cGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgg > 1:1355047/1‑101 (MQ=255) gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgga > 1:313636/1‑100 (MQ=255) gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgga > 1:1152124/1‑100 (MQ=255) gTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCgga > 1:218184/1‑100 (MQ=255) tGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggat < 1:107242/101‑3 (MQ=255) aaaTCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgc < 2:1611020/101‑5 (MQ=255) tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggc < 1:936977/101‑8 (MQ=255) tCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggc < 2:1538911/101‑8 (MQ=255) cGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggcg < 2:1358902/101‑9 (MQ=255) gagaAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCggatgcggcgt > 1:1343175/1‑92 (MQ=255) | CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑ > 146/10076‑10176 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |