| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 146 | = 10176 | 0 (0.000) | 9 (0.150) | 6/186 | 3.2 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 82 | = 2357 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑ > 146/10070‑10176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccggATGCGGCGT < 82/2357‑2349 TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCA < 2:1533473/101‑1TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCA < 2:1606896/101‑1 GGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 1:1308536/101‑1 GGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 2:1348064/101‑1 GGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 2:972246/101‑1 GGTATAGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCAT < 2:1176765/101‑1 GTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATG > 1:590142/1‑101 TATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGC > 1:725644/1‑101 TATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGC > 2:1610428/1‑101 ATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCC > 1:286594/1‑101 ATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCC < 2:1565898/101‑1 CGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG > 1:1355047/1‑101 GTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA > 1:218184/1‑101 GTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA > 1:1152124/1‑101 GTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA > 1:313636/1‑101 TGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAT < 1:107242/101‑1 AAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGC < 2:1611020/101‑1 TCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGC < 2:1538911/101‑1 TCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGC < 1:936977/101‑1 CGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCG < 2:1358902/101‑1 GAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT > 1:1343175/1‑101 TGGTATCGTGAAATCGAGAAGGCAGAAGCGAAAAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGG‑‑‑‑‑‑‑‑‑ > 146/10070‑10176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccggATGCGGCGT < 82/2357‑2349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |