| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 135 | = 12670 | 0 (0.000) | 32 (0.480) | 23/200 | 2.9 | 46.4% | intergenic (–/–) | –/– | –/– |
| ? | 44 | 30875 = | 74 (1.110) | intergenic (–/–) | –/– | –/– | |||||
TGGATGCAAAAGCAGAACGGATAAGCAAGAGTAGGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 135/12570‑12670 | agccgccccctatcgtgctatcgtgcctgcgtaagctggataagacgcGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTg < 2:701799‑M2/53‑1 (MQ=255) ccgccccctatcgtgctatcgtgcctgcgtaagctggataagacgcGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCctgac < 1:799894‑M2/55‑3 (MQ=255) ccgccccctatcgtgctatcgtgcctgcgtaagctggataagacgcGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCctgac < 1:1613527‑M2/55‑3 (MQ=255) ccctatcgtgctatcgtgcctgcgtaagctggataagacgcGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGccatcctgacggctg > 2:50146‑M2/42‑94 (MQ=255) cctgcgtaagcTGGATAAGACGCTCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttga < 2:1086272‑M1/96‑26 (MQ=255) ctgcgtaagCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgat < 1:1004258‑M1/97‑27 (MQ=255) ctgcgtaagCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgat > 2:1348332‑M1/5‑75 (MQ=255) cgtAAGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcc > 2:236701‑M1/2‑72 (MQ=255) cTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcag > 2:1055248‑M1/1‑66 (MQ=255) tGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagt > 2:1677049‑M1/1‑65 (MQ=255) acaaaagacgCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtt > 2:209775‑M1/5‑64 (MQ=255) tAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttat < 2:472342‑M1/101‑41 (MQ=255) tAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttat > 1:1033792‑M1/1‑61 (MQ=255) tAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttat < 1:329546‑M1/101‑41 (MQ=255) aaGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatg < 2:1663881‑M1/101‑42 (MQ=255) aaGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatg > 1:1144236‑M1/1‑60 (MQ=255) ccAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggaaggcccttcgctttatttgatgcctggcagtttattgcgggggg > 1:1444810‑M1/1‑52 (MQ=255) gCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcct < 1:374980‑M1/101‑53 (MQ=255) gCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcct < 2:771256‑M1/101‑53 (MQ=255) cGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggggggctc > 2:1650692‑M1/1‑48 (MQ=255) tCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggtgttgtccc > 2:1673629‑M1/1‑46 (MQ=255) tCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcc < 1:50146‑M1/101‑56 (MQ=255) aTCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcggcctgcccccc > 1:395306‑M1/1‑42 (MQ=255) aTTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcggggggcctgccccccccccccc > 1:872437‑M1/1‑35 (MQ=255) tttttttCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcggcctaccccccccaccccc > 1:1225597‑M1/1‑34 (MQ=255) ttttttCTGCGCCAATGCAAAAAGGCCATCCTGtcgcatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgg < 1:1531310‑M1/101‑69 (MQ=255) tttttCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccggg < 1:1055253‑M1/101‑70 (MQ=255) ttttCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggc < 2:866210‑M1/101‑71 (MQ=255) tCTGCGCCAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgt < 1:1341295‑M1/101‑74 (MQ=255) cTGCGCCAATGCAAAAAGGCCATCCTGactgatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgtt < 1:1497891‑M1/101‑75 (MQ=255) cAATGCAAAAAGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcg < 2:1641142‑M1/101‑81 (MQ=255) aaGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttca < 1:1391737‑M1/101‑90 (MQ=255) aGGCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaa < 1:1673635‑M1/101‑91 (MQ=255) gCCATCCTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaat < 1:1346731‑M1/101‑93 (MQ=255) ccTGccgggtggcgtttctctttatttgatgcctggcagtttatggcgggcttcctgcccgccgccctccgggccgttgcttcgcaacgttcaaatccgct < 2:253569‑M1/101‑98 (MQ=255) ccTGacggatggcctttcgctttatttgatgcctggcagtttatggcgggcgtcctgcccgccaccctccgggccgttgcttcgcaacgttcaaatccgct < 1:1499874‑M1/101‑98 (MQ=255) | TGGATGCAAAAGCAGAACGGATAAGCAAGAGTAGGCTGGATAAGACGCGCCAGCGTCGCATCCGGCATTTTTTTCTGCGCCAATGCAAAAAGGCCATCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 135/12570‑12670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |