| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | 21717 = | 24 (0.360) | 35 (0.530) | 28/200 | 1.8 | 74.5% | intergenic (–/–) | –/– | –/– |
| ? | 182 | = 6967 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
TTCGAAGAAGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA > 1/21617‑21816 | gcgagatgtggaaacggcgaggcacttcacattttttcggattattgcaaatgaggataaaaaaaccgggtttccccggtttcagagtgatgataaaagca < 1:682132‑M1/1‑1 (MQ=255) tCGAAGAAGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGaa < 1:1364177/101‑1 (MQ=255) gagatgtggaaacggcgaggcacttcacattttttcggattattgcaaatgaggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcaaa > 2:225804‑M1/99‑101 (MQ=255) cGAAGAAGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGaaa > 2:1327770/1‑101 (MQ=255) gaagaaGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGaaaa < 1:704424/101‑1 (MQ=255) gaagCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAg < 1:1372092/101‑1 (MQ=255) gcgcAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGAt < 1:1061502/101‑1 (MQ=255) gcgcAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGAt < 2:547079/101‑1 (MQ=255) cAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATgcg < 2:1161776/101‑1 (MQ=255) aaaTTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGCAGAAGACTGATGACAAACGGAAAACAGCATGATgcgc > 1:497241/1‑101 (MQ=255) aaaTTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATgcgc > 2:199941/1‑101 (MQ=255) aaTTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCt < 2:485742/101‑1 (MQ=255) ttCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTAc < 1:1495532/101‑1 (MQ=255) cGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGc > 2:1214287/1‑101 (MQ=255) gTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCt < 1:913727/101‑1 (MQ=255) tGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGTAAACAGCCTGATGCGCTACGCtt > 1:124384/1‑101 (MQ=255) tGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCtt < 2:881273/101‑1 (MQ=255) ccAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATc < 1:207538/101‑1 (MQ=255) cAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCa > 1:488054/1‑101 (MQ=255) gTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAgg < 2:593321/101‑1 (MQ=255) gTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAgg < 2:418155/101‑1 (MQ=255) tCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACa < 1:520171/101‑1 (MQ=255) tCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACa < 2:1558751/101‑1 (MQ=255) aGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACAtt > 2:869587/1‑101 (MQ=255) gCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACAttt > 1:867355/1‑101 (MQ=255) gCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACAttt < 2:616360/101‑1 (MQ=255) tattgcaaatgaggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCtt < 1:1397366‑M1/43‑1 (MQ=255) attgcaaatgaggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTg > 2:258063‑M1/58‑101 (MQ=255) tGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccg < 1:1214292‑M1/101‑7 (MQ=255) gCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaa > 1:209782‑M1/1‑92 (MQ=255) tGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaata < 2:101205‑M1/101‑12 (MQ=255) aatgaggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAatat < 1:227482‑M1/50‑1 (MQ=255) atgaggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATAtg > 2:532919‑M1/51‑101 (MQ=255) tATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatatt > 2:958324‑M1/1‑86 (MQ=255) ggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa < 2:14863‑M1/55‑1 (MQ=255) ggataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCa > 1:126596‑M1/47‑101 (MQ=255) gataaaaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCAt > 1:467594‑M1/46‑101 (MQ=255) gCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttg < 1:826205‑M1/101‑23 (MQ=255) aaaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACtt < 2:60827‑M1/61‑1 (MQ=255) aaaaccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACttt < 2:1388483‑M1/62‑1 (MQ=255) aTCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgag > 2:541638‑M1/1‑77 (MQ=255) ccgggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAg > 2:47164‑M1/36‑101 (MQ=255) gggtttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGc > 1:1204664‑M1/34‑101 (MQ=255) ttccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGAGCATTACTTTGTAGGCCGGa < 2:48941‑M1/72‑1 (MQ=255) tccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGAt > 1:313198‑M1/29‑101 (MQ=255) tccccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGAt > 1:737487‑M1/29‑101 (MQ=255) aTAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtagg > 2:1262535‑M1/1‑66 (MQ=255) aTAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtagg < 2:1711746‑M1/101‑36 (MQ=255) aTAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtagg > 1:1191302‑M1/1‑66 (MQ=255) cccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATaa < 2:671048‑M1/75‑1 (MQ=255) cccggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATaa < 1:842097‑M1/75‑1 (MQ=255) gCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccg > 1:34308‑M1/1‑63 (MQ=255) cggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAgg > 1:1119953‑M1/25‑101 (MQ=255) cggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAgg > 2:214427‑M1/25‑101 (MQ=255) ggtttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGc < 1:986664‑M1/78‑1 (MQ=255) cGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccgg > 2:1111231‑M1/1‑62 (MQ=255) cGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccgg < 2:867350‑M1/101‑40 (MQ=255) gaagaaGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccgga > 1:74709‑M1/1‑61 (MQ=255) tttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGt < 2:589834‑M1/80‑1 (MQ=255) ttcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGtt < 1:1602710‑M1/81‑1 (MQ=255) agaagaCTGATGACAAACGGTAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggata < 2:124384‑M1/101‑43 (MQ=255) agaagaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggata > 1:1686919‑M1/1‑59 (MQ=255) tcagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTc < 2:72810‑M1/82‑1 (MQ=255) cagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCTTTACTTTGTAGGCCCGATAAGGCGTtct > 2:418584‑M1/19‑100 (MQ=255) cagagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGGCGGATAAGGCGTTCa > 1:1440493‑M1/19‑101 (MQ=255) agagtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCAc > 1:832591‑M1/18‑101 (MQ=255) agaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataagg > 2:563616‑M1/1‑56 (MQ=255) gaCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggc < 2:1577382‑M1/101‑47 (MQ=255) aCTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcg > 2:1165894‑M1/1‑54 (MQ=255) gtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGTCGTTCAcgcc < 2:1381260‑M1/87‑1 (MQ=255) gtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCAcgcc < 2:692051‑M1/87‑1 (MQ=255) gtgatgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCAcgcc < 2:496952‑M1/87‑1 (MQ=255) tgatgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgtt < 2:1051122‑M1/101‑50 (MQ=255) atgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCa < 2:36533‑M1/90‑1 (MQ=255) atgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttca < 2:546695‑M1/101‑52 (MQ=255) tgataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCAt < 1:155927‑M1/91‑1 (MQ=255) tgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttcac < 2:1639717‑M1/101‑53 (MQ=255) tgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttcac > 1:1430900‑M1/1‑49 (MQ=255) tgaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcggtcac > 2:1527126‑M1/1‑49 (MQ=255) gaCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttcacg < 2:1428437‑M1/101‑54 (MQ=255) ataaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATcc > 2:1663490‑M1/9‑101 (MQ=255) aCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttcacgc > 2:887322‑M1/1‑47 (MQ=255) aCAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttcacgc < 2:627619‑M1/101‑55 (MQ=255) taaaagcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCg < 2:952753‑M1/94‑1 (MQ=255) cGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcggtttgtaggccggataaggcgttcacgccgcat < 2:1191297‑M1/101‑60 (MQ=255) gcAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATg < 2:708437‑M1/99‑1 (MQ=255) gAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTtctccgcaatatattgaatttgcgcgggttgtaggccggataaggcgttcacgccgcatcc > 1:287722‑M1/1‑40 (MQ=255) | TTCGAAGAAGCGGCGCAAATTCGTGACCAGTTGCATCAGCTGCGTGAGCTGTTTATCGCGGCATCGTAACAGGATAGCGAAGAAGACTGATGACAAACGGAAAACAGCCTGATGCGCTACGCTTATCAGGCCTACATTTCCTTGCAATATGTGCATTACTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATGA > 1/21617‑21816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |