New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 198 | 1 = | 0 (0.000) | 32 (0.630) +GGCCTACGTTCAGCACGTTACTCC |
20/152 | 1.8 | 54.3% | intergenic (–/–) | –/– | –/– |
? | 6 | 35383 = | 71 (1.070) | intergenic (–/–) | –/– | –/– |
GACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 198/97‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCGGATAAGACGTGGCAAGCGTCGCATCCGGCAATGTGCTTCAACT > 6/35383‑35431 |||||||||||||||||||||||| GACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCC > 1:123884/1‑101 CGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTA > 2:470164/1‑101 ATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGT > 2:1280295/1‑101 ATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGT < 1:1608552/101‑1 ATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGGAAACGCCTTAACCGGCCTACGT > 2:382124/1‑101 ATAATAAATATGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGAAAGATTGGGAGTTACCTGCCGGATGAGGCGTAAACGCCTTATCCAGCCTACGT > 2:91340/1‑101 TAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTT > 1:1706719/1‑101 ATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCA < 1:1382488/101‑1 TAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAG < 2:605703/101‑1 AAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGC > 2:1597567/1‑101 AAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGC > 2:135978/1‑101 AATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCA > 1:1057911/1‑101 TTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGT > 1:174996/1‑101 TGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTT > 2:588410/1‑101 GTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTA > 2:167743/1‑101 gGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTAC < 2:349665/100‑1 TGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTAC < 2:1660824/101‑1 GGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGGCGAAACGACTTATTCGGCCTACGTTCAGCACCTTACT > 1:1534794/1‑101 GGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACT < 1:30349/101‑1 GTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTC > 2:324704/1‑101 GTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTC < 1:1488544/101‑1 CTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAG > 2:1068809/1‑101 CTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCCGCCTACGTTCAGCACGTTACTCCAG > 2:813976/1‑101 CTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCCGATGGCGCGTAAACCCCTTATCCGGCCTACGTTCAGCACGTTACTCCAG > 2:1500301/1‑101 TGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGG < 2:300915/101‑1 TGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGG > 2:895115/1‑101 GAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGC > 2:816276/1‑101 TGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAG > 1:1270220/1‑101 GAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGA < 1:357251/101‑1 GTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCG > 2:337664/1‑101 GTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCG > 2:1683762/1‑101 CGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTC < 2:486249/101‑1 CGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCA > 2:847520/1‑101 GGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCAT > 2:489553/1‑101 GTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATC > 2:1056266/1‑101 TAAGATTGGGAGTTACCTGCCGGATGCGGCTTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCC < 1:816281/101‑1 TAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCC < 2:130000/101‑1 AAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCG > 2:98873/1‑101 AGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGG > 1:343314/1‑101 AGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGG > 1:1543346/1‑101 GATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGC < 2:1238736/101‑1 ATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCA > 2:792767/1‑101 TGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAAT > 1:1119109/1‑101 GAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTc < 2:1221660/101‑2 AGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTct < 2:527573/101‑3 AGTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTct > 2:1376134/1‑99 GTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTCCGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGCCGCATCCGGCAATGTctg > 2:1661600/1‑98 GTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctg < 1:1698565/101‑4 GTTACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctg > 1:1179738/1‑98 TACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgcc > 1:1648125/1‑96 ACCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgccc > 1:404524/1‑95 CCTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgccca < 1:1569387/101‑8 TGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGTTCAGCACGTTACTCCAGGCCGGATAAGACGCGGCAAGCGTCGCATCCGGCAATGTctgcccagt < 2:1176545/101‑10 |||||||||||||||||||||||| GACGAATAATAAATTTGTGGTACTGAAAGCGGTGAAGCTGGGACGTCGTCGGTAAGATTGGGAGTTACCTGCCGGATGCGGCGTAAACGCCTTATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 198/97‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGCCGGATAAGACGTGGCAAGCGTCGCATCCGGCAATGTGCTTCAACT > 6/35383‑35431 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |