| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 198 | 1 = | 0 (0.000) | 32 (0.630) +GGCCTACGTTCAGCACGTTACTCC |
20/152 | 1.8 | 54.3% | intergenic (–/–) | –/– | –/– |
| ? | 6 | 35383 = | 71 (1.070) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTTATTATTCGTCGCAA > 198/1‑101 | actgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCa < 2:1176545‑M1/28‑1 (MQ=255) tgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAgg < 1:1569387‑M1/30‑1 (MQ=255) gggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGt > 1:404524‑M1/71‑101 (MQ=255) ggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTa > 1:1648125‑M1/70‑101 (MQ=255) cagacattgccggatgcggcgcttgccgcgtcttatccggcctggagtaacgtgctgaacggaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAAc > 2:1661600‑M1/68‑101 (MQ=255) cagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAAc < 1:1698565‑M1/34‑1 (MQ=255) cagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAAc > 1:1179738‑M1/68‑101 (MQ=255) agacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt < 2:527573‑M1/35‑1 (MQ=255) agacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt > 2:1376134‑M1/67‑101 (MQ=255) gacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTc < 2:1221660‑M1/36‑1 (MQ=255) attgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCa > 1:1119109‑M1/63‑101 (MQ=255) tgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAAt > 2:792767‑M1/61‑101 (MQ=255) gccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATc < 2:1238736‑M1/42‑1 (MQ=255) ccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt > 1:343314‑M1/59‑101 (MQ=255) ccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt > 1:1543346‑M1/59‑101 (MQ=255) cggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCtt > 2:98873‑M1/58‑101 (MQ=255) ggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTa < 2:130000‑M1/45‑1 (MQ=255) ggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTAAGCCGCATCCGGCAGGTAACTCCCAATCTTa < 1:816281‑M1/45‑1 (MQ=255) gatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAc > 2:1056266‑M1/56‑101 (MQ=255) atgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc > 2:489553‑M1/55‑101 (MQ=255) tgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcg > 2:847520‑M1/54‑101 (MQ=255) gacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcgacg < 2:486249‑M1/51‑1 (MQ=255) cgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCgacgac > 2:1683762‑M1/49‑101 (MQ=255) cgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCgacgac > 2:337664‑M1/49‑101 (MQ=255) tcttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTc < 1:357251‑M1/64‑1 (MQ=255) cttatccggcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCa > 1:1270220‑M1/37‑101 (MQ=255) gcctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTc > 2:816276‑M1/29‑101 (MQ=255) cctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCa < 2:300915‑M1/74‑1 (MQ=255) cctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCa > 2:895115‑M1/28‑101 (MQ=255) ctggagtaacgtgctgaacgtaggcgGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAg > 2:813976‑M1/27‑101 (MQ=255) ctggagtaacgtgctgaacgtaggccGGATAAGGGGTTTACGCGCCATCGGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAg > 2:1500301‑M1/27‑101 (MQ=255) ctggagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAg > 2:1068809‑M1/27‑101 (MQ=255) gagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTAc < 1:1488544‑M1/78‑1 (MQ=255) gagtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTAc > 2:324704‑M1/24‑101 (MQ=255) agtaaggtgctgaacgtaggccGAATAAGTCGTTTCGCCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTAcc > 1:1534794‑M1/23‑101 (MQ=255) agtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTAcc < 1:30349‑M1/79‑1 (MQ=255) gtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTaccc < 2:349665‑M1/80‑2 (MQ=255) gtaacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACca < 2:1660824‑M1/80‑1 (MQ=255) taacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACcac > 2:167743‑M1/21‑101 (MQ=255) aacgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACcaca > 2:588410‑M1/20‑101 (MQ=255) acgtgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACaa > 1:174996‑M1/19‑101 (MQ=255) tgctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAAtt > 1:1057911‑M1/16‑101 (MQ=255) gctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAAttt > 2:1597567‑M1/15‑101 (MQ=255) gctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAAttt > 2:135978‑M1/15‑101 (MQ=255) ctgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATtta < 2:605703‑M1/88‑1 (MQ=255) tgaacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATttat < 1:1382488‑M1/89‑1 (MQ=255) aacgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATttatta > 1:1706719‑M1/11‑101 (MQ=255) acgtaggctGGATAAGGCGTTTACGCCTCATCCGGCAGGTAACTCCCAATCTTTCCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACATATTtattat > 2:91340‑M1/10‑101 (MQ=255) acgtaggccGGTTAAGGCGTTTCCGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTtattat > 2:382124‑M1/10‑101 (MQ=255) acgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTtattat < 1:1608552‑M1/92‑1 (MQ=255) acgtaggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTtattat > 2:1280295‑M1/10‑101 (MQ=255) taggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTTATTATtcg > 2:470164‑M1/7‑101 (MQ=255) ggccGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTTATTATtcgtc > 1:123884‑M1/5‑101 (MQ=255) ggATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTTATTATTCGTCGCaa > 1:357635/1‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCAGTACCACAAATTTATTATTCGTCGCAA > 198/1‑101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |