New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 25 | = 29432 | 30 (0.540) | 32 (0.590) +CGC |
27/194 | 1.4 | 68.7% | intergenic (–/–) | –/– | –/– |
? | 56 | = 26090 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 56/25990‑26090 | ttttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAgggggg < 1:179981/101‑1 (MQ=255) tAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcg > 1:528528‑M2/1‑98 (MQ=255) aGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgc > 1:455212‑M2/1‑97 (MQ=255) aGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgc < 2:360243‑M2/101‑5 (MQ=255) gTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGGAGGCTGCGGCAGGGGGGgcgct > 2:1688185‑M2/1‑96 (MQ=255) aCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcggttttc > 2:1716913‑M2/1‑92 (MQ=255) cAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcc > 2:588921‑M2/1‑91 (MQ=255) cAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttctcgccccccc < 2:569792‑M2/101‑20 (MQ=255) aTAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaac > 1:1068817‑M2/1‑79 (MQ=255) aCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctc > 1:457714‑M2/1‑75 (MQ=255) ggTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctc > 1:1223949‑M2/1‑73 (MQ=255) ataATCACCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagag > 2:913119‑M2/1‑66 (MQ=255) taATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagagg > 1:1553815‑M2/1‑65 (MQ=255) aTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgctttttcccccccccccacccccccccccccaggg < 1:361713‑M2/101‑39 (MQ=255) tCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggc > 1:1533032‑M2/1‑62 (MQ=255) aCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgag > 2:1364164‑M2/1‑59 (MQ=255) ccTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgagg > 1:1054498‑M2/1‑58 (MQ=255) cTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggg > 2:500440‑M2/1‑57 (MQ=255) tGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgagggg > 1:577500‑M2/1‑56 (MQ=255) ggCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgagggga > 2:305486‑M2/1‑55 (MQ=255) tgtgAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcacccccaccctccccccagaggggggaggggaccg < 2:1362334‑M2/101‑50 (MQ=255) aGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtatt > 2:848077‑M2/1‑48 (MQ=255) gTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattg > 1:284578‑M2/1‑47 (MQ=255) taGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaat > 1:1429436‑M2/1‑40 (MQ=255) gTTGCCAGGGCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgtttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatat > 1:11476‑M2/1‑38 (MQ=255) tGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattg > 2:1182060‑M2/1‑36 (MQ=255) gCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattgt > 1:215675‑M2/1‑35 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattgttac > 1:623226‑M2/1‑32 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattgttac > 1:81810‑M2/1‑32 (MQ=255) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattgttac > 1:771524‑M2/1‑32 (MQ=255) gACCGGAGCAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctcccccgaggggcgggggggccggattgtgcaaaaattgttacccccgc < 2:1369635‑M2/101‑76 (MQ=255) cAGGCTGCGGCAGGGGGGgcgcttttcccctccccctaaccctctccccagagggtcgaggcgaccgtattgtgcaaatattgttaccccagcaacaaaca > 1:1692278‑M2/1‑18 (MQ=255) cAGGCTGCGGCAGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattgttaccccagcaacaaaca > 2:568268‑M2/1‑18 (MQ=255) aGGGGGGgcgcttttcccctcaccctaaccctctccccagaggggcgaggggaccgtattgtgcaaatattgttaccccagcaacaaacaggctcatacag > 2:444250‑M2/1‑7 (MQ=255) | TTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 56/25990‑26090 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |