| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 25 | = 29432 | 30 (0.540) | 32 (0.590) +CGC |
27/194 | 1.4 | 68.7% | intergenic (–/–) | –/– | –/– |
| ? | 56 | = 26090 | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
CTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCGTGTTCCATAA > 25/29342‑29532 | cTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccct > 2:444250‑M1/1‑91 (MQ=255) tgtttgttGCTGGGGTAACAATATTTGCACAATACGGTCGCCTCGACCCTCTGGGGAGAGGGTTAGGGGGAGGGGAAAAGcgccccccctgccgcagcctg > 1:1692278‑M1/1‑80 (MQ=255) tgtttgttGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctg > 2:568268‑M1/1‑80 (MQ=255) gcgggggtaaCAATTTTTGCACAATCCGGCCCCCCCGCCCCTCGGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtc < 2:1369635‑M1/98‑30 (MQ=255) gTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacct > 1:81810‑M1/1‑66 (MQ=255) gTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacct > 1:771524‑M1/1‑66 (MQ=255) gTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacct > 1:623226‑M1/1‑66 (MQ=255) aCAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggc > 1:215675‑M1/1‑63 (MQ=255) cAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggca > 2:1182060‑M1/1‑62 (MQ=255) atatTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAAcgccccccctgccgcagcctgctccggtcggccctggcaac > 1:11476‑M1/1‑60 (MQ=255) atTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaacta > 1:1429436‑M1/1‑58 (MQ=255) agcgcgatcGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCaa > 2:1321808/9‑101 (MQ=38) gcgcgatcGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCaaa < 1:54513/94‑1 (MQ=255) caATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctac > 1:284578‑M1/1‑51 (MQ=255) aaTACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctact > 2:848077‑M1/1‑50 (MQ=255) catcgttCCCCTCGCTCCTCTGGGCAGAGGGTAAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAAc < 1:1477885/95‑1 (MQ=255) atcGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACg > 1:583416/3‑101 (MQ=255) cGGTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGAt < 2:1664733/101‑1 (MQ=255) cGGTCCCCTCCCCCCTCTGGGGGGAGGGTGGGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcaca < 2:1362334‑M1/101‑56 (MQ=255) gTCCCCTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATaa < 2:1096081/101‑1 (MQ=255) tCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagcc > 2:305486‑M1/1‑43 (MQ=255) ccccTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAgg > 2:372100/1‑101 (MQ=255) ccccTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAgg < 2:51290/101‑1 (MQ=255) ccccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagcca > 1:577500‑M1/1‑42 (MQ=255) cccTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGc > 1:1267597/1‑101 (MQ=255) cccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccag > 2:500440‑M1/1‑41 (MQ=255) ccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccagg > 1:1054498‑M1/1‑40 (MQ=255) cTCGCTCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAg < 1:867126/101‑1 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggt > 2:1364164‑M1/1‑39 (MQ=255) gCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttga > 1:1533032‑M1/1‑36 (MQ=255) ctccTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCa > 2:773054/3‑101 (MQ=255) ctccTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCa > 1:373195/3‑101 (MQ=255) ccctgggggggggggggtggggggGGGGGAAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgat < 1:361713‑M1/94‑67 (MQ=255) ccTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgatta > 1:1553815‑M1/1‑33 (MQ=255) ctctGGGGAGAGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccagggtgattat > 2:913119‑M1/1‑32 (MQ=255) ctctGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATcc > 1:1125365/1‑101 (MQ=255) ggAGAGGGTTAGGGGGGGGGAAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTctct < 2:1479457/101‑1 (MQ=255) gagaGGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataacc > 1:1223949‑M1/1‑25 (MQ=255) gagaGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCtt < 1:1314468/101‑1 (MQ=255) gagaGGGTTAGGCTGAGGGGAAAAGCCATGATCGAAACCAATCTGCCCCCATCGCCCGCCTTTACGAATTAAATAACGATAAGGCAATCCATCCGTCTCtt < 2:1239376/101‑1 (MQ=255) agagGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCGGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCttt < 1:1368280/101‑1 (MQ=255) gagggtgagggtGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTc < 1:720491/101‑1 (MQ=255) gagGGTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgt > 1:457714‑M1/1‑23 (MQ=255) gagGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTc < 2:971176/101‑1 (MQ=255) agGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCg > 1:38059/1‑101 (MQ=255) agGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCg < 1:1718415/101‑1 (MQ=255) gggTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGc > 1:1206286/1‑101 (MQ=255) gTTAGGGTGAGGGGAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttat > 1:1068817‑M1/1‑19 (MQ=255) gggggggcgagaaaagcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttatctg < 2:569792‑M1/91‑86 (MQ=255) tGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTc > 1:456593/1‑101 (MQ=255) tGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTc > 1:400108/1‑101 (MQ=255) ggggggAAAAGGCGTCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCg < 2:1200008/99‑1 (MQ=255) ggggAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCgtg > 2:716316/1‑101 (MQ=255) ggAAAAGcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttatctgttcgtactg > 2:588921‑M1/1‑7 (MQ=255) ggAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCGTGtt > 2:950679/1‑101 (MQ=255) gAAAACcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttatctgttcgtactgt > 2:1716913‑M1/1‑6 (MQ=255) aaGGCGGCATCGAAGCCAATCTGCCCCCATCAACGGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCGTGTTCCAt > 2:1612347/1‑101 (MQ=255) aaGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCGTGTTCCAt < 2:1094669/101‑1 (MQ=255) aGcgccccccctgccgcagcctcctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttatctgttcgtactgtttac > 2:1688185‑M1/1‑2 (MQ=255) ggcggcATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCGTGTTCCATaa < 1:431852/101‑1 (MQ=255) gcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttatctgttcgtactgtttact < 2:360243‑M1/101‑101 (MQ=255) gcgccccccctgccgcagcctgctccggtcggacctggcaactatagctactcacagccaggttgattataataaccgtttatctgttcgtactgtttact > 1:455212‑M1/1‑1 (MQ=255) | CTGTATGAGCCTGTTTGTTGCTGGGGTAACAATATTTGCACAATACGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAGGCGGCATCGAAGCCAATCTGCCCCCATCAACCGCCTTTACGAATCAAATAACGATAAGGCAGTCCATCCGTCTCTTTCGCAACCAGTTCGTGTTCCATAA > 25/29342‑29532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |