New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 2 | 22853 = | 67 (1.120) | 21 (0.400) +ACGCG |
15/190 | 2.7 | 39.8% | intergenic (–/–) | –/– | –/– |
? | 203 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTCCAGCAGCAGA > 203/1‑99 | gcgccttatccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCg < 2:839620‑M2/52‑1 (MQ=255) cgccttatccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCgg > 2:73757‑M2/49‑101 (MQ=255) cgccttatccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCgg < 1:1598372‑M2/53‑1 (MQ=255) gccttatccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGt > 2:1470019‑M2/48‑101 (MQ=255) cttatccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCt > 2:1459691‑M2/46‑101 (MQ=255) atccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACa < 1:357587‑M2/59‑1 (MQ=255) tccgacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAg < 2:786418‑M2/60‑1 (MQ=255) gacctacattggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGc > 2:293571‑M2/39‑101 (MQ=255) ggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACt < 1:1470025‑M2/73‑1 (MQ=255) ggtggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACt < 2:156867‑M2/73‑1 (MQ=255) ggtcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTaa > 2:149013‑M2/26‑101 (MQ=255) tcccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAac < 2:1636805‑M2/78‑1 (MQ=255) cccgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAact < 1:774264‑M2/79‑1 (MQ=255) cgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAactac < 2:1504784‑M2/81‑1 (MQ=255) cgtaggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAactac < 1:1625298‑M2/81‑1 (MQ=255) taggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAActacta < 2:658598‑M2/83‑1 (MQ=255) aggcctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACtactac > 2:443616‑M2/18‑101 (MQ=255) ctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGt > 1:1268271‑M2/14‑101 (MQ=255) ctgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGt > 1:1619970‑M2/14‑101 (MQ=255) tgataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTc > 1:1089086‑M2/13‑101 (MQ=255) ataagacgcgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTCca < 1:1137759‑M2/91‑1 (MQ=255) accgcgTCAGCGACGCGTCAGGATTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTCcagcag < 1:1521652‑M2/95‑1 (MQ=255) gcgTCAGCGACGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTCcagcagcag < 2:1474874‑M2/98‑1 (MQ=255) cgTCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTCCAGCAGCAGa < 2:912311‑M2/99‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCGTCGCATCAGGCTTCAATTGCCGGAGAAGGCGATAATGCCTTATCCGGTCTACAGTGCAGGTGAAACTTAAACTACTACACGTCCAGCAGCAGA > 203/1‑99 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |