New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 2 | 22853 = | 67 (1.120) | 21 (0.400) +ACGCG |
15/190 | 2.7 | 39.8% | intergenic (–/–) | –/– | –/– |
? | 203 | 1 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCATGTCA > 2/22757‑22953 | tggacgtgtagtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTAt < 1:1137759‑M1/5‑1 (MQ=255) ggAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTAt < 2:12008/101‑1 (MQ=255) gAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATc > 2:1186276/1‑101 (MQ=255) gacgtgtagtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCa > 1:1089086‑M1/95‑101 (MQ=255) agaaCTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCa < 1:476217/98‑1 (MQ=255) aGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCa > 1:423730/1‑101 (MQ=255) acgtgtagtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAg > 1:1619970‑M1/94‑101 (MQ=255) acgtgtagtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAg > 1:1268271‑M1/94‑101 (MQ=255) cACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAgg < 1:604356/101‑1 (MQ=255) cACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAgg > 2:1119605/1‑101 (MQ=255) cTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGcc > 2:76164/1‑101 (MQ=255) ttCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCt > 1:225473/1‑101 (MQ=255) ttCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCt < 1:1096824/101‑1 (MQ=255) gtagtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCt > 2:443616‑M1/90‑101 (MQ=255) tagtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTa < 2:658598‑M1/13‑1 (MQ=255) tCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTa < 1:1233337/101‑1 (MQ=255) cTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAc > 2:1396018/1‑101 (MQ=255) gtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTAcg < 2:1504784‑M1/15‑1 (MQ=255) gtagtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTAcg < 1:1625298‑M1/15‑1 (MQ=255) agtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCtacggg < 1:774264‑M1/17‑3 (MQ=255) gtttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCctacggga < 2:1636805‑M1/18‑4 (MQ=255) ttaagtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGgcctacgggacc > 2:149013‑M1/82‑96 (MQ=255) ggTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcat < 2:400561/101‑1 (MQ=255) agtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATcaggcctacgggaccacc < 2:156867‑M1/23‑9 (MQ=255) agtttcacctgcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATcaggcctacgggaccacc < 1:1470025‑M1/23‑9 (MQ=255) gTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc > 2:1151020/1‑101 (MQ=255) tGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCg < 2:758949/101‑1 (MQ=255) aaCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGAt < 2:692129/101‑1 (MQ=255) aCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg > 1:331844/1‑101 (MQ=255) aCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg > 1:472547/1‑101 (MQ=255) cTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAAGCCTACGCGGATCATCGATGt > 2:730530/1‑101 (MQ=255) tGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTa > 2:1488199/1‑101 (MQ=255) gggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAg < 2:225473/101‑1 (MQ=255) gcactgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTc > 2:293571‑M1/69‑101 (MQ=255) aaTTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTc < 2:333409/101‑1 (MQ=255) aTTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCg > 1:1008231/1‑101 (MQ=255) ctgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGa < 2:786418‑M1/36‑1 (MQ=255) tgtagaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGAt < 1:357587‑M1/37‑1 (MQ=255) cGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGan < 1:842479/101‑2 (MQ=255) cGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGAt < 2:1087157/101‑1 (MQ=255) agaccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGATAAg > 2:1459691‑M1/62‑101 (MQ=255) accggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGATAAGGc > 2:1470019‑M1/60‑101 (MQ=255) ccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGATAAGgcg > 2:73757‑M1/59‑100 (MQ=255) ccggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGATAAGgcg < 1:1598372‑M1/43‑2 (MQ=255) cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGGGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGc > 2:965114/1‑101 (MQ=255) naaaaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCa > 1:1038484/2‑101 (MQ=255) gAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTACCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCa < 2:1043783/101‑1 (MQ=255) cggataaggcattatcgccttctccggcaattgaagcctgatgcgacgctgacgcgtCTTATCAGGCCTACG‑GGACCACCAATGTAGGTCGGATAAggcgc < 2:839620‑M1/44‑3 (MQ=255) aaaaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCAc > 1:586082/1‑101 (MQ=255) aaaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTc > 1:1094610/1‑101 (MQ=255) ctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgccg > 1:421841/1‑101 (MQ=255) tcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgccgc > 2:733142/1‑101 (MQ=255) gCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCAt > 2:452621/1‑101 (MQ=255) cTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCTCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATc > 2:1118039/1‑101 (MQ=255) cTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATc > 1:1063030/1‑101 (MQ=255) tGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATcc > 2:716779/1‑101 (MQ=255) gCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCg > 1:1502274/1‑101 (MQ=255) ataataACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGAc < 2:1032069/101‑1 (MQ=255) ataataACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTAACAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGAc > 1:1701401/1‑101 (MQ=255) aataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCTTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACaa < 1:480666/101‑1 (MQ=255) ataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAg > 2:351686/1‑101 (MQ=255) taaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAgc < 2:1351498/101‑1 (MQ=255) aaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAgcg > 1:559936/1‑101 (MQ=255) aaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAgcg > 1:723541/1‑101 (MQ=255) aTGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCa > 1:1045281/1‑101 (MQ=255) aTGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCa < 2:331844/101‑1 (MQ=255) tGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCAt > 2:904135/1‑101 (MQ=255) ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATg < 2:412341/101‑1 (MQ=255) cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGAt > 1:1482103/1‑101 (MQ=255) cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGAt > 1:875338/1‑101 (MQ=255) aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATa > 1:569290/1‑101 (MQ=255) aTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATacg < 1:1522530/101‑1 (MQ=255) aTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATacg < 1:1376921/101‑1 (MQ=255) tGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATacga > 2:207379/1‑101 (MQ=255) gcagcaTTGCCCGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATacgac < 2:643124/101‑1 (MQ=255) aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTa < 1:234784/101‑1 (MQ=255) tGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAAc < 1:502588/101‑1 (MQ=255) tGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAAc < 1:1327263/101‑1 (MQ=255) cTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAAcgcg > 2:19114/1‑101 (MQ=255) cTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAAcgcg > 1:1234554/1‑101 (MQ=255) tGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGt > 1:1406789/1‑101 (MQ=255) gAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTc < 1:111285/101‑1 (MQ=255) aGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAAAGCGTCtt > 1:35854/1‑101 (MQ=255) gcgcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCttt < 2:323223/101‑1 (MQ=255) cTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCa < 1:1349952/101‑1 (MQ=255) cTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCa > 2:1015280/1‑101 (MQ=255) cTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCa > 1:75014/1‑101 (MQ=255) tACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCAt > 1:38744/1‑101 (MQ=255) cTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCATGTCa < 2:125688/101‑1 (MQ=255) cTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCATGTCa > 1:1608243/1‑101 (MQ=255) | GGAGCACTTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGACAAGCGCTGCATGATACGACGCCTAACGCGTCTTTTCATGTCA > 2/22757‑22953 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |