New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 11 | 51743 = | 64 (1.010) | 45 (0.940) | 26/158 | 1.1 | 64.0% | intergenic (–/–) | –/– | –/– |
? | 180 | 22 = | 0 (0.000) | intergenic (–/–) | –/– | –/– |
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCAACTTGAAGTATGACGAGTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAGCCAGAT > 180/1‑120 | caggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagt > 2:649489‑M2/101‑101 (MQ=255) caggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagt < 1:923048‑M2/1‑1 (MQ=255) caggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagt > 2:579757‑M2/101‑101 (MQ=255) caggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagt < 1:1280894‑M2/1‑1 (MQ=255) aggaaggcggcaaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTa > 1:1304911‑M2/100‑101 (MQ=255) aggaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagTa > 2:811333‑M2/100‑101 (MQ=255) aggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagTa > 2:407333‑M2/100‑101 (MQ=255) aggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagTa < 2:757945‑M2/2‑1 (MQ=255) aggaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagTa > 1:1201814‑M2/100‑101 (MQ=255) ggaaggcggcaaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTAt < 1:734472‑M2/3‑1 (MQ=255) ggaaggcggcaaacgagtgaagccccaggagcttacataagtaagtgactggggtaaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTAt < 2:1688096‑M2/3‑1 (MQ=255) gaaggcggcaaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATg > 2:366497‑M2/98‑101 (MQ=255) gaaggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagTata > 1:1497260‑M2/98‑100 (MQ=255) gaaggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagTata < 1:565970‑M2/4‑2 (MQ=255) aaggcggcaaacgagtgaagccccaggagattacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATgg < 2:1452780‑M2/5‑1 (MQ=255) aggcgacaagcgagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagtatatt < 2:848861‑M2/6‑4 (MQ=255) ggcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagtataagg < 2:843651‑M2/7‑5 (MQ=255) gcggcaaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAg < 1:703028‑M2/8‑1 (MQ=255) gcgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagtataaggc < 2:709514‑M2/8‑6 (MQ=255) cggcaaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAgg > 1:525405‑M2/93‑101 (MQ=255) cgacaagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagtataaggcc > 1:1630167‑M2/93‑95 (MQ=255) gcaaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgctgcacatgcaacttgaagtatgacgagTATGGcagggg > 2:564231‑M2/91‑99 (MQ=255) caaacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGt < 2:1037275‑M2/12‑1 (MQ=255) aagagagtgaatccccaggagcttacataagtaagtgactggggtgagcgaacgcagacgcagcacatgcaacttgaagtatgacgagtataaggcccgac < 2:1600480‑M2/13‑11 (MQ=255) aacgagtgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTgg < 2:1440045‑M2/14‑1 (MQ=255) tgaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGGGTGGCAGCAt > 1:1637418‑M2/82‑101 (MQ=255) gaagccgcaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATg < 1:428979‑M2/21‑1 (MQ=255) gaagccccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATg < 2:1634578‑M2/21‑1 (MQ=255) ccaggagcttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATAc > 2:1686196‑M2/75‑101 (MQ=255) aggagcttacataagtaagtgactggggtgaacgaatgcagtcgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCAtgcaatgcaa < 2:1678595‑M2/29‑1 (MQ=255) cttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCt < 1:1119660‑M2/34‑1 (MQ=255) cttacataaggaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGCGGGAACGTGCAATACCACGCCt > 2:836634‑M2/68‑101 (MQ=255) ttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCtt < 1:210950‑M2/35‑1 (MQ=255) ttacataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAAACCCtt > 2:1516845‑M2/67‑101 (MQ=255) acataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAg > 2:792637‑M2/65‑101 (MQ=255) acataagtaagtgactggggtgaacgaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGAAGCATGCAATACAACCCCTTAg < 1:569349‑M2/37‑1 (MQ=255) aaagtgggtggggtgaccaaatgcagccgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGGGGCAGCATGCAATACACCCCCTTAggaaaacc < 2:288643‑M2/44‑3 (MQ=255) cgcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCt > 2:1371157‑M2/31‑101 (MQ=255) gcagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTc < 2:1528111‑M2/72‑1 (MQ=255) cagcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCg > 1:75097‑M2/29‑101 (MQ=255) agcacatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTTCCGACTTTGCCTCgg > 2:479452‑M2/28‑101 (MQ=255) acatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTTCCTCGGCTg > 2:1099575‑M2/25‑101 (MQ=255) acatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTg > 1:921290‑M2/25‑101 (MQ=255) acatgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTg > 1:276762‑M2/25‑101 (MQ=255) atgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTa > 1:1211668‑M2/23‑101 (MQ=255) tgcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTAt < 2:1315303‑M2/80‑1 (MQ=255) gcaacttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATg < 1:857040‑M2/81‑1 (MQ=255) acttgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGAcc > 2:963397‑M2/18‑101 (MQ=255) tgaagtatgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCttt < 1:1231336‑M2/87‑1 (MQ=255) tGAAGTATGACGAGTATGGCAGGAGGGGCAACATGCAATACAACCCCTTAAGAAAAACCGACCTTCGCGTTTCCCGACCTTGCCTCGGCTGTATGACCctt > 1:379336/1‑101 (MQ=255) aGTATGACGAGTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTTGc > 2:1320376/1‑101 (MQ=255) atgacgagTATGGCAGGAGTGGCAGCATGCAATGCAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAg > 2:1059274‑M2/9‑101 (MQ=255) atgacgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAg > 2:1375201‑M2/9‑101 (MQ=255) cgagTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTTGCGAGCCAg > 1:1314044‑M2/5‑101 (MQ=255) agTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAGCCAGAt < 2:525400‑M2/99‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCAACTTGAAGTATGACGAGTATGGCAGGAGTGGCAGCATGCAATACAACCCCTTAGGAAAAACCGACCTTCGCGTTTCCCGACTTTGCCTCGGCTGTATGACCTTTGGCGAGCCAGAT > 180/1‑120 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |