New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 1 = | 0 (0.000) | 27 (0.420) | 22/198 | 2.7 | 100% | intergenic (–/–) | –/– | –/– |
? | 43 | = 31195 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
GCGACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T > 43/31096‑31196 | gcgACTACAAAGGCGATGCCCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAt > 2:1604817‑M2/1‑100 (MQ=255) gcgACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAt > 1:1363509‑M2/1‑100 (MQ=255) gcgACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAt > 1:905081‑M2/1‑100 (MQ=255) cgACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtg > 1:553027‑M2/1‑99 (MQ=255) aCTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgcc < 2:835496‑M2/101‑5 (MQ=255) tACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccgg > 2:195536‑M2/1‑95 (MQ=255) aaaGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatg < 1:241047‑M2/101‑10 (MQ=255) ggCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcgg < 1:1709558‑M2/101‑13 (MQ=255) ggCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcgg > 1:398397‑M2/1‑89 (MQ=255) cGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcg < 2:472115‑M2/101‑15 (MQ=255) gACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgac < 1:1421815‑M2/101‑19 (MQ=255) cccGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccg < 2:1477250‑M2/101‑21 (MQ=255) gACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgcct < 2:1417908‑M2/101‑24 (MQ=255) cAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatcc > 2:1622044‑M2/1‑73 (MQ=255) aGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccg > 2:493833‑M2/1‑72 (MQ=255) cGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggc < 1:1376544‑M2/101‑32 (MQ=255) ggTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcc < 2:141008‑M2/101‑33 (MQ=255) gTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcct < 2:846143‑M2/101‑34 (MQ=255) gTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcct > 2:190280‑M2/1‑68 (MQ=255) aGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgacccccttatccggcctac < 2:859320‑M2/101‑36 (MQ=255) aaaaaCGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaac < 1:480363‑M2/101‑41 (MQ=255) cGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaa < 2:937983‑M2/101‑46 (MQ=255) cGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaa < 2:441595‑M2/101‑46 (MQ=255) aaGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaa < 2:363608‑M2/101‑49 (MQ=255) aaGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaa < 1:1018837‑M2/101‑49 (MQ=255) aTTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaattcaatatatt < 2:356472‑M2/101‑60 (MQ=255) aTTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaattcaatatatt < 2:1275715‑M2/101‑60 (MQ=255) tttAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaattcaatatattg < 1:156106‑M2/101‑61 (MQ=255) tttAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaattcaatatattg > 1:858550‑M2/1‑41 (MQ=255) tAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCAtgccggatgcggcgtgaccgccttatccggcctacgaaaccgcaagaattcaatatattgca > 1:1477256‑M2/1‑39 (MQ=255) | GCGACTACAAAGGCGATGACCCGACGCCAGCGGTAGGGTAAAAACGAAAGGGGGCAACATTTAGTTGCCCCGAGATTGCTAACAAAGTGCGCGTTGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T > 43/31096‑31196 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |