New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 1 = | 0 (0.000) | 27 (0.420) | 22/198 | 2.7 | 100% | intergenic (–/–) | –/– | –/– |
? | 43 | = 31195 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
TGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 10/62‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTAGTCGC < 43/31195‑31096 TGCAATATATTGAATTCTTGCGGTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTA > 1:1477256/1‑101 CAATATATTGAATTCTTGCGGTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAA > 1:858550/1‑101 CAATATATTGAATTCTTGCGGTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAA < 1:156106/101‑1 AATATATTGAATTCTTGCGGTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAAT < 2:1275715/101‑1 AATATATTGAATTCTTGCGGTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAAT < 2:356472/101‑1 ttcttgcggTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTT < 2:363608/92‑1 ttcttgcggTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTT < 1:1018837/92‑1 ttgcggTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCG < 2:937983/95‑1 ttgcggTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCG < 2:441595/95‑1 gTTTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTT < 1:480363/100‑1 GTAGGCCGGATAAGGGGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCT < 2:859320/101‑1 AGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTAC < 2:846143/101‑1 AGGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTAC > 2:190280/1‑101 GGCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACC < 2:141008/101‑1 GCCGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCG < 1:1376544/101‑1 CGGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCT > 2:493833/1‑101 GGATAAGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTG > 2:1622044/1‑101 AGGCGGTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTC < 2:1417908/101‑1 cggTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGG < 2:1477250/98‑1 gTCACGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTC < 1:1421815/100‑1 CGCCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCG < 2:472115/101‑1 CCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCC > 1:398397/1‑101 CCGCATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCC < 1:1709558/101‑1 CATCCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTT < 1:241047/101‑1 CCGGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTA > 2:195536/1‑101 GGCATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTAGT < 2:835496/101‑1 CATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTAGTCG > 1:553027/1‑101 ATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTAGTCGC > 1:1363509/1‑101 ATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTAGTCGC > 1:905081/1‑101 ATGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGGCATCGCCTTTGTAGTCGC > 2:1604817/1‑101 TGCAATATATTGAATTTGCACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < 10/62‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTGAACAACGCGCACTTTGTTAGCAATCTCGGGGCAACTAAATGTTGCCCCCTTTCGTTTTTACCCTACCGCTGGCGTCGGGTCATCGCCTTTGTAGTCGC < 43/31195‑31096 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |