| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 196 | 1 = | 0 (0.000) | 35 (0.620) | 28/198 | 1.1 | 44.0% | intergenic (–/–) | –/– | –/– |
| ? | 91 | = 8411 | 89 (1.470) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTAC > 196/1‑98 | tatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGt > 2:1045766‑M1/69‑101 (MQ=255)tatcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGt < 1:216856‑M1/33‑1 (MQ=255) atcaggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTc < 1:206792‑M1/34‑1 (MQ=255) caggcctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAg < 2:1256254‑M1/36‑1 (MQ=255) gcctacgtgaactctgcaatatattgaatttgcatgcttttgtgggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCaa < 1:115378‑M1/39‑1 (MQ=255) cctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAAt < 1:1708527‑M1/40‑1 (MQ=255) ctacgtgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAAtt < 2:197023‑M1/41‑1 (MQ=255) tgaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTgaga < 2:1485386‑M1/46‑1 (MQ=255) gaactctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGaa > 1:1620452‑M1/55‑101 (MQ=255) tctgcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACg < 1:330415‑M1/51‑1 (MQ=255) gcaatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGa > 2:266712‑M1/48‑101 (MQ=255) caatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATGTGAGAAAacgggga < 2:1575602‑M1/55‑3 (MQ=255) aatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCATCAATTTGAGAACACGGGaaa > 2:1250463‑M1/46‑101 (MQ=255) aatatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGaaa < 2:1492626‑M1/56‑1 (MQ=255) atatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGaaaa < 2:499167‑M1/57‑1 (MQ=255) atatattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGaaaa < 2:507342‑M1/57‑1 (MQ=255) tattgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAAt > 2:488299‑M1/42‑101 (MQ=255) tgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTa < 2:156463‑M1/63‑1 (MQ=255) tgaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTa < 2:1392435‑M1/63‑1 (MQ=255) gaatttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTAt > 1:1244004‑M1/38‑101 (MQ=255) atttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCt < 1:1008613‑M1/66‑1 (MQ=255) atttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCt < 2:903019‑M1/66‑1 (MQ=255) atttgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCt > 2:736176‑M1/36‑101 (MQ=255) tgcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGtt > 1:834608‑M1/33‑101 (MQ=255) gcatgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGttt < 2:487874‑M1/70‑1 (MQ=255) catgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGtttt < 2:1300101‑M1/71‑1 (MQ=255) catgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGtttt < 1:1278693‑M1/71‑1 (MQ=255) atgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTa < 1:1099239‑M1/72‑1 (MQ=255) tgcttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTAc > 1:305410‑M1/29‑101 (MQ=255) cttttgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCg < 2:203353‑M1/75‑1 (MQ=255) tgtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCa > 1:203353‑M1/23‑101 (MQ=255) gtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCAt < 2:893257‑M1/80‑1 (MQ=255) gtaggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCAt > 1:448665‑M1/22‑101 (MQ=255) aggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATaa > 1:1492817‑M1/20‑101 (MQ=255) ggccggataaggcgtttaCGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTGCCGCCCATAAg > 1:1492632‑M1/19‑101 (MQ=255) aaggcgtttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACGGCCCATAAGCCACCgag > 2:677706/11‑101 (MQ=38) aaggcgtttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgag < 2:1362754/91‑1 (MQ=255) aaggcgtttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgag > 1:2466/11‑101 (MQ=255) aaggcgtttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgag > 2:741859/11‑101 (MQ=255) agcgtttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGAAATTTGAGAACACGGGAAAAAATTTATCTGTTTTGCCGCCCATAAGCCACCGAGAc < 1:480780/93‑1 (MQ=255) gtttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGtt < 1:487879/96‑1 (MQ=255) tgtacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTa < 1:1367440/97‑1 (MQ=255) ttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTAc < 1:1569450/98‑1 (MQ=255) ttacgccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTAc < 1:197023/98‑1 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTAC > 196/1‑98 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |