New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 117 1 =0 (0.000)25 (0.440) 23/196 1.9 49.5% intergenic (–/–) –/– –/–
?76 = 13488 51 (0.840)intergenic (–/–) –/– –/–

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCTTCT  >  117/1‑100
                                                                                                    |                                                                                                   
cctcgctctgtagggagagggccggggtgggggtgattgttcgcaccggtgctggtctgttcccctcaccctaaccctctccccgaaggggcgaggggacg                                                                                                     >  1:1075542‑M1/101‑101 (MQ=255)
 ctcgctctgtagggagagggccggggtgggggtgattgttcgcaccggtgctggtctgttcccctcaccctaaccctctccccgaaggggcgaggggacgg                                                                                                    >  2:205721‑M1/100‑101 (MQ=255)
          tagggagagggccggggtgggggtgattgttcgcaccggtgctggtctgttcccctcaccctaacaccctccccgaaggggcgcggggacgggtcgggcga                                                                                           <  1:82288‑M1/11‑10 (MQ=255)
              ggtgagggctggggtgagggttaatgttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTg                                                                                       >  1:1439641‑M1/87‑101 (MQ=255)
                    ggctggggtgagggttaatgttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAAt                                                                                 >  1:1470037‑M1/81‑101 (MQ=255)
                    ggctggggtgagggttaatgttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAAt                                                                                 >  2:885052‑M1/81‑101 (MQ=255)
                             gagggttaatgttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTa                                                                        >  2:1602379‑M1/72‑101 (MQ=255)
                                 gttaatgttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGcc                                                                    >  2:847282‑M1/68‑101 (MQ=255)
                                    aatgttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCtt                                                                 >  1:594506‑M1/65‑101 (MQ=255)
                                       gttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAAc                                                              >  1:368446‑M1/62‑101 (MQ=255)
                                        ttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAAcc                                                             >  2:372894‑M1/61‑101 (MQ=255)
                                        ttcgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAAcc                                                             >  1:864562‑M1/61‑101 (MQ=255)
                                          cgcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCtt                                                           >  2:509690‑M1/59‑101 (MQ=255)
                                           gcaccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCtta                                                          >  2:202408‑M1/58‑101 (MQ=255)
                                            caccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCttat                                                         >  1:5253‑M1/57‑101 (MQ=255)
                                             accagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCttatt                                                        >  2:538888‑M1/56‑101 (MQ=255)
                                              ccagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCttatta                                                       >  1:1591923‑M1/55‑101 (MQ=255)
                                               cagtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATtaa                                                      >  2:659712‑M1/54‑101 (MQ=255)
                                                agtgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATtaat                                                     >  1:1004371‑M1/53‑101 (MQ=255)
                                                  tgctggctgttcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATtaataa                                                   >  1:600196‑M1/51‑101 (MQ=255)
                                                            tcccctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTg                                         >  1:427077‑M1/41‑101 (MQ=255)
                                                               cctcaccctaaccctctccccaaaggggcgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGAtt                                      <  1:1481461‑M1/64‑1 (MQ=255)
                                                                                           cgaggggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAAc          >  1:1501288‑M1/10‑101 (MQ=255)
                                                                                                ggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCt     <  2:890191‑M1/97‑1 (MQ=255)
                                                                                                ggacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCt     >  2:1064440‑M1/5‑101 (MQ=255)
                                                                                                 gacGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCtt    >  1:348825‑M1/4‑101 (MQ=255)
                                                                                                  acGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCTTc   <  2:817046‑M1/99‑1 (MQ=255)
                                                                                                   cGGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCTTCt  >  1:1514770‑M1/2‑101 (MQ=255)
                                                                                                    |                                                                                                   
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGATTGTGCGCTTTGTCGAATTTGTCATTACGCCCTTAACCTTATTAATAACAGGAAGCTGATTTGTGAGACTCGCCCCGCTCTACCGCAACGCCCTTCT  >  117/1‑100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.