New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	117	1 =	0 (0.000)	25 (0.440)	23/196	1.9	49.5%	intergenic (–/–)	–/–	–/–
	?	76	= 13488	51 (0.840)					intergenic (–/–)	–/–	–/–

AGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  117/100‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGTCCCCTCGCCCCTTCGGGGAGAGGGTTAGGGTGAGGGGAACAGACCAGCACCGGTGCGAACAATCACCCCCACCCCGGCCCTCTCCCTACAGAGCGAGG  <  76/13488‑13389                                                                                                                                                                                                          AGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCG                                                                                                     >  1:1514770/1‑101  GAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGT                                                                                                    <  2:817046/101‑1   AAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTC                                                                                                   >  1:348825/1‑101    AGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCC                                                                                                  <  2:890191/101‑1    AGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCC                                                                                                  >  2:1064440/1‑101         GTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCG                                                                                             >  1:1501288/1‑101                                     AATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGG                                                                 <  1:1481461/101‑1                                        CAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGA                                                              >  1:427077/1‑101                                                  TTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCA                                                   >  1:600196/1‑101                                                    ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACt                                                 >  1:1004371/1‑100                                                     TTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACtg                                                >  2:659712/1‑99                                                      TAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGG                                               >  1:1591923/1‑101                                                       AATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGT                                              >  2:538888/1‑101                                                        ATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTG                                             >  1:5253/1‑101                                                         TAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGC                                            >  2:202408/1‑101                                                          AAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCG                                           >  2:509690/1‑101                                                            GGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAA                                         >  1:864562/1‑101                                                            GGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAA                                         >  2:372894/1‑101                                                             GTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAAC                                        >  1:368446/1‑101                                                                AAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAACAtt                                     >  1:594506/1‑99                                                                   GGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAACAttaac                                  >  2:847282/1‑96                                                                       TAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAACATTAACCCtc                              >  2:1602379/1‑99                                                                                ATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAACATTAACCCTCACCCCAGCC                     >  2:885052/1‑101                                                                                ATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAACATTAACCCTCACCCCAGCC                     >  1:1470037/1‑101                                                                                      CAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAG‑CCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACC               >  1:1439641/1‑101                                                                                          tcgcccgacCCGTCCCCGCGCCCCTTCGGGGAGGGTGTTAGGGTGAGGGGAACAGACCAGCACCGGTGCGAACAATCACCCCCACCCCGGCCCTCTCCCTA            <  1:82288/92‑1                                                                                                   CCGTCCCCTCGCCCCTTCGGGGAGAGGGTTAGGGTGAGGGGAACAGACCAGCACCGGTGCGAACAATCACCCCCACCCCGGCCCTCTCCCTACAGAGCGAG   >  2:205721/1‑101                                                                                                    CGTCCCCTCGCCCCTTCGGGGAGAGGGTTAGGGTGAGGGGAACAGACCAGCACCGGTGCGAACAATCACCCCCACCCCGGCCCTCTCCCTACAGAGCGAGG  >  1:1075542/1‑101                                                                                                                                                                                                          AGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  117/100‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccGTCCCCTCGCCCCTTCGGGGAGAGGGTTAGGGTGAGGGGAACAGACCAGCACCGGTGCGAACAATCACCCCCACCCCGGCCCTCTCCCTACAGAGCGAGG  <  76/13488‑13389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.