| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 105 | 1 = | 0 (0.000) | 58 (0.910) | 48/198 | 0.3 | 100% | intergenic (–/–) | –/– | –/– |
| ? | 172 | 2 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCACCCATGA > 105/1‑100 | gttgtttttgccggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatctagccctgataagCGTAGCGCa < 2:1377041‑M1/9‑1 (MQ=255) ttgtttttgccggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCAt > 2:526971‑M1/92‑101 (MQ=255) tgtttttgccggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATc > 2:709785‑M1/91‑101 (MQ=255) gtttttgccggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCa < 2:669654‑M1/12‑1 (MQ=255) gccggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAAc > 2:540183‑M1/84‑101 (MQ=255) ccggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACt < 2:1431979‑M1/19‑1 (MQ=255) ggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTAc > 2:1218943‑M1/81‑101 (MQ=255) ggatgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTAc > 1:1656978‑M1/81‑101 (MQ=255) ggacgcggcgtgaacgccttatccgacccacaaagtcgtgcaaaatcaataaattgcaggaacgatgcagccctcataagCGTAGCGCatcaggcccctac < 2:1502968‑M1/21‑7 (MQ=255) tgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGtt > 1:37878‑M1/78‑101 (MQ=255) tgcggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGtt < 1:351930‑M1/24‑1 (MQ=255) tcggggtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattggaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGttt > 2:529143‑M1/77‑101 (MQ=255) cggcgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGtttt > 2:1689771‑M1/76‑101 (MQ=255) ggcgtgaacgccttagccgacccacaaagtctggcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGttttt > 2:1216964‑M1/75‑101 (MQ=255) cgtgaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTAt > 2:186605‑M1/73‑101 (MQ=255) gaacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGc > 2:1229496‑M1/70‑101 (MQ=255) aacgccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCg > 2:177651‑M1/69‑101 (MQ=255) gccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAg < 1:1683140‑M1/36‑1 (MQ=255) ccttatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGc < 2:408396‑M1/37‑1 (MQ=255) tatccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGc < 2:627327‑M1/40‑1 (MQ=255) tatccgacccacaaagtcatgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGc < 1:1456575‑M1/40‑1 (MQ=255) atccgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCa < 2:949708‑M1/41‑1 (MQ=255) cgacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATcc > 2:1238363‑M1/58‑101 (MQ=255) gacccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCg > 1:1338174‑M1/57‑101 (MQ=255) acccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCgg < 1:1059999‑M1/46‑1 (MQ=255) acccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCgg < 2:305938‑M1/46‑1 (MQ=255) ccacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGtt < 2:1391859‑M1/48‑1 (MQ=255) cacaaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGttt < 1:1655734‑M1/49‑1 (MQ=255) caaagtcttgcaaaatcaataaattgcaggaacgatgtagacctgataagCGTAGCGCATCAGGGAACTCCGTTTTTATTGCGAAGCCGCATCCGGTTTAc > 1:483090‑M1/51‑101 (MQ=255) aaagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACg < 1:1618668‑M1/52‑1 (MQ=255) aagtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGc > 1:949713‑M1/49‑101 (MQ=255) agtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCa < 1:1629858‑M1/54‑1 (MQ=255) gtcttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCaa < 2:424215‑M1/55‑1 (MQ=255) cttgcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATg > 1:1210941‑M1/45‑101 (MQ=255) gcaaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCa > 2:1622444‑M1/42‑101 (MQ=255) caaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAg > 1:147659‑M1/41‑101 (MQ=255) aaaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGt > 1:222698‑M1/40‑101 (MQ=255) aaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTg > 1:1598730‑M1/39‑101 (MQ=255) aaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTg < 2:473988‑M1/63‑1 (MQ=255) aaatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATACGGTTTACGCAATGCCAGTg < 2:1526002‑M1/63‑1 (MQ=255) aatcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTgg < 1:1339148‑M1/64‑1 (MQ=255) atcaataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGa < 1:917578‑M1/65‑1 (MQ=255) caataaattgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGAtt < 1:523372‑M1/67‑1 (MQ=255) tgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTa > 1:693991‑M1/27‑101 (MQ=255) tgcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTa < 2:1536776‑M1/75‑1 (MQ=255) gcaggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTAt > 2:351930‑M1/26‑101 (MQ=255) caggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATc < 1:1705721‑M1/77‑1 (MQ=255) aggaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATcc < 2:972527‑M1/78‑1 (MQ=255) gaacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCt > 2:1237695‑M1/22‑101 (MQ=255) aacgatgtaggcctgatgagCGTACCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCtt > 2:32613‑M1/21‑101 (MQ=255) aacgatgtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCtt < 1:66596‑M1/81‑1 (MQ=255) gtaggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGtaat > 1:340790‑M1/15‑101 (MQ=255) taggcctgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGtaata > 1:616634‑M1/14‑101 (MQ=255) tgataagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCAc < 2:460132‑M1/94‑1 (MQ=255) taagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCACCCa < 1:1526492‑M1/97‑1 (MQ=255) aagCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCACCCAt > 1:1583384‑M1/4‑101 (MQ=255) agCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCACCCATg > 1:1536782‑M1/3‑101 (MQ=255) gCGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCACCCATGa > 2:288931‑M1/2‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTAGCGCATCAGGCAACTACGTTTTTATTGCGAAGCCGCATCCGGTTTACGCAATGCCAGTGGATTGAGCTTTATCCCTTCGTAATAACTCACCCATGA > 105/1‑100 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |