New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 105 1 =0 (0.000)58 (0.910) 48/198 0.3 100% intergenic (–/–) –/– –/–
?172 2 = 0 (0.000)intergenic (–/–) –/– –/–

TCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  105/100‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTC  >  172/2‑93
                                                                                                                                                                                                
TCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGC                                                                                             >  2:288931/1‑101
 CATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCT                                                                                            >  1:1536782/1‑101
  ATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTT                                                                                           >  1:1583384/1‑101
   TGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTA                                                                                          <  1:1526492/101‑1
      GTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCA                                                                                       <  2:460132/101‑1
            TATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTA                                                                                 >  1:616634/1‑101
             ATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTAC                                                                                >  1:340790/1‑101
                   AAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGGTACGCTCATCAGGCCTACATCGTT                                                                          >  2:32613/1‑101
                   AAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTT                                                                          <  1:66596/101‑1
                    AGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTC                                                                         >  2:1237695/1‑101
                      GGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCT                                                                       <  2:972527/101‑1
                       GATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTG                                                                      <  1:1705721/101‑1
                        ATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGC                                                                     >  2:351930/1‑101
                         TAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCA                                                                    >  1:693991/1‑101
                         TAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCA                                                                    <  2:1536776/101‑1
                                 AATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTG                                                            <  1:523372/101‑1
                                   TCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGAT                                                          <  1:917578/101‑1
                                    CCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATT                                                         <  1:1339148/101‑1
                                     CACTGGCATTGCGTAAACCGTATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTT                                                        <  2:1526002/101‑1
                                     CACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTT                                                        >  1:1598730/1‑101
                                     CACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTT                                                        <  2:473988/101‑1
                                      ACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTT                                                       >  1:222698/1‑101
                                       CTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTG                                                      >  1:147659/1‑101
                                        TGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGC                                                     >  2:1622444/1‑101
                                           CATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAG                                                  >  1:1210941/1‑101
                                             TTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGAC                                                <  2:424215/101‑1
                                              TGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACT                                               <  1:1629858/101‑1
                                               GCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTT                                              >  1:949713/1‑101
                                                CGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTT                                             <  1:1618668/101‑1
                                                 GTAAACCGGATGCGGCTTCGCAATAAAAACGGAGTTCCCTGATGCGCTACGCTTATCAGGTCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTG                                            >  1:483090/1‑101
                                                   AAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTG                                          <  1:1655734/101‑1
                                                    AACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGG                                         <  2:1391859/101‑1
                                                      CCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGT                                       <  1:1059999/101‑1
                                                      CCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGT                                       <  2:305938/101‑1
                                                       CGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTC                                      >  1:1338174/1‑101
                                                        GGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCG                                     >  2:1238363/1‑101
                                                           TGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGAT                                  <  2:949708/101‑1
                                                            GCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCATGACTTTGTGGGTCGGATA                                 <  1:1456575/101‑1
                                                            GCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATA                                 <  2:627327/101‑1
                                                               GCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGG                              <  2:408396/101‑1
                                                                CTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGC                             <  1:1683140/101‑1
                                                                   CGCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTT                          >  2:177651/1‑101
                                                                    GCAATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTC                         >  2:1229496/1‑101
                                                                       ATAAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACG                      >  2:186605/1‑101
                                                                         AAAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCCAGACTTTGTGGGTCGGCTAAGGCGTTCACGCC                    >  2:1216964/1‑101
                                                                          AAAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCG                   >  2:1689771/1‑101
                                                                           AAACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTCCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACCCCGa                  >  2:529143/1‑100
                                                                            AACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCA                 <  1:351930/101‑1
                                                                            AACGTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCA                 >  1:37878/1‑101
                                                                               gtagggGCCTGATGCGCTACGCTTATGAGGGCTGCATCGTTCCTGCAATTTATTGATTTTGCACGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCGTCC              <  2:1502968/95‑1
                                                                               GTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCC              >  2:1218943/1‑101
                                                                               GTAGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCC              >  1:1656978/1‑101
                                                                                 AGTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGg            <  2:1431979/101‑2
                                                                                  GTTGCCTGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGgc           >  2:540183/1‑99
                                                                                        TGATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAaaaac     <  2:669654/101‑6
                                                                                         GATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAaaaaca    >  2:709785/1‑95
                                                                                          ATGCGCTACGCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAaaaacaa   >  2:526971/1‑94
                                                                                           TGCGCTACGCTTATCAGGGCTAGATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGGCAaaaacaac  <  2:1377041/101‑9
                                                                                                                                                                                                
TCATGGGTGAGTTATTACGAAGGGATAAAGCTCAATCCACTGGCATTGCGTAAACCGGATGCGGCTTCGCAATAAAAACGTAGTTGCCTGATGCGCTACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  105/100‑1
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCTTATCAGGCCTACATCGTTCCTGCAATTTATTGATTTTGCAAGACTTTGTGGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTC  >  172/2‑93

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.