New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	10	1 =	0 (0.000)	29 (0.470)	21/200	2.6	100%	intergenic (–/–)	–/–	–/–
	?	174	= 7466	0 (0.000)					intergenic (–/–)	–/–	–/–

CACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/44‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTGGCAAT  <  174/7466‑7367                                                                                                                                                  gtgctctacGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCT                                             <  1:986543/92‑1   gctctacGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGC                                           >  2:576650/8‑101   gctctacGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGC                                           >  1:1475200/8‑101     tctacGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTC                                         >  1:255680/6‑101     tctacGTAGGCCGGATAAGCCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTC                                         <  1:772656/96‑1      ctacGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCC                                        <  1:1715780/97‑1        acGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAG                                      >  1:164065/3‑101          GTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGAT                                    <  1:163460/101‑1          GTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGAT                                    >  2:1002511/1‑101          GTAGCCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGAT                                    <  1:864816/101‑1           TAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATA                                   >  2:249068/1‑101               CCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACG                               <  2:117406/101‑1               CCGGATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACG                               >  2:1298916/1‑101                   ATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGG                           >  1:1583876/1‑101                   ATAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGG                           >  2:1562385/1‑101                    TAAGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGT                          <  1:600283/101‑1                      AGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTT                        >  1:673411/1‑101                      AGGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTT                        <  2:1606163/101‑1                       GGCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTG                       >  1:1228620/1‑101                        GCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGT                      <  1:1064030/101‑1                        GCGTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGT                      >  1:50089/1‑101                          GTTCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGCCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATCCGGTGGTTTGTGC                    >  2:24676/1‑101                            TCACGCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCG                  >  2:1399420/1‑101                                GCCGCATCCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTG              >  2:1207759/1‑101                                       CCGGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTG       <  1:272681/101‑1                                         GGCATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTGGC     <  1:1002516/101‑1                                            ATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTGGCAAT  >  2:1080951/1‑101                                            ATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTGGCAAT  >  1:916720/1‑101                                            ATAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTGGCAAT  <  1:622512/101‑1                                                                                                                                                  CACGATTTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  10/44‑1 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAAACTAAGCTCGCTGTAACCCAGTCGTTCAACGTTTGTAATCGATGGCTTCTGGCTGCTCCAGATATACGGTGGTTTGTGCCGGTTGTGTGCTGGCAAT  <  174/7466‑7367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.