New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? 10 1 =0 (0.000)29 (0.470) 21/200 2.6 100% intergenic (–/–) –/– –/–
?174 = 7466 0 (0.000)intergenic (–/–) –/– –/–

ATTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  174/7367‑7466
                                                                                                   |                                            
aTTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAt                                             <  1:622512‑M2/101‑2 (MQ=255)
aTTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAt                                             >  2:1080951‑M2/1‑100 (MQ=255)
aTTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAt                                             >  1:916720‑M2/1‑100 (MQ=255)
   gCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgcc                                          <  1:1002516‑M2/101‑5 (MQ=255)
     cAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccgg                                        <  1:272681‑M2/101‑7 (MQ=255)
            caACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggc                                 >  2:1207759‑M2/1‑88 (MQ=255)
                cGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtga                             >  2:1399420‑M2/1‑84 (MQ=255)
                  gCACAAACCACCGGATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGGCTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaac                           >  2:24676‑M2/1‑82 (MQ=255)
                    acaAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgc                         >  1:50089‑M2/1‑80 (MQ=255)
                    acaAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgc                         <  1:1064030‑M2/101‑22 (MQ=255)
                     caAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcc                        >  1:1228620‑M2/1‑79 (MQ=255)
                      aaaCCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcct                       <  2:1606163‑M2/101‑24 (MQ=255)
                      aaaCCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcct                       >  1:673411‑M2/1‑78 (MQ=255)
                        accaccGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcctta                     <  1:600283‑M2/101‑26 (MQ=255)
                         ccaccGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttat                    >  1:1583876‑M2/1‑75 (MQ=255)
                         ccaccGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttat                    >  2:1562385‑M2/1‑75 (MQ=255)
                             cGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccgg                >  2:1298916‑M2/1‑71 (MQ=255)
                             cGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccgg                <  2:117406‑M2/101‑31 (MQ=255)
                                 tatCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggccta            >  2:249068‑M2/1‑67 (MQ=255)
                                  atCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccgggctac           <  1:864816‑M2/101‑36 (MQ=255)
                                  atCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctac           <  1:163460‑M2/101‑36 (MQ=255)
                                  atCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctac           >  2:1002511‑M2/1‑66 (MQ=255)
                                    cTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgt         >  1:164065‑M2/1‑64 (MQ=255)
                                      ggAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtag       <  1:1715780‑M2/101‑40 (MQ=255)
                                       gAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacggcttatccggcctacgtaga      <  1:772656‑M2/101‑41 (MQ=255)
                                       gAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtaga      >  1:255680‑M2/1‑61 (MQ=255)
                                         gcagcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtagagc    >  1:1475200‑M2/1‑59 (MQ=255)
                                         gcagcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtagagc    >  2:576650‑M2/1‑59 (MQ=255)
                                           agcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtagagcac  <  1:986543‑M2/101‑45 (MQ=255)
                                                                                                   |                                            
ATTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  174/7367‑7466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.