New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | 10 | 1 = | 0 (0.000) | 29 (0.470) | 21/200 | 2.6 | 100% | intergenic (–/–) | –/– | –/– |
? | 174 | = 7466 | 0 (0.000) | intergenic (–/–) | –/– | –/– |
ATTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 174/7367‑7466 | aTTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAt < 1:622512‑M2/101‑2 (MQ=255) aTTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAt > 2:1080951‑M2/1‑100 (MQ=255) aTTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAt > 1:916720‑M2/1‑100 (MQ=255) gCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgcc < 1:1002516‑M2/101‑5 (MQ=255) cAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccgg < 1:272681‑M2/101‑7 (MQ=255) caACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggc > 2:1207759‑M2/1‑88 (MQ=255) cGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtga > 2:1399420‑M2/1‑84 (MQ=255) gCACAAACCACCGGATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGGCTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaac > 2:24676‑M2/1‑82 (MQ=255) acaAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgc > 1:50089‑M2/1‑80 (MQ=255) acaAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgc < 1:1064030‑M2/101‑22 (MQ=255) caAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcc > 1:1228620‑M2/1‑79 (MQ=255) aaaCCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcct < 2:1606163‑M2/101‑24 (MQ=255) aaaCCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcct > 1:673411‑M2/1‑78 (MQ=255) accaccGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgcctta < 1:600283‑M2/101‑26 (MQ=255) ccaccGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttat > 1:1583876‑M2/1‑75 (MQ=255) ccaccGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttat > 2:1562385‑M2/1‑75 (MQ=255) cGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccgg > 2:1298916‑M2/1‑71 (MQ=255) cGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccgg < 2:117406‑M2/101‑31 (MQ=255) tatCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggccta > 2:249068‑M2/1‑67 (MQ=255) atCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccgggctac < 1:864816‑M2/101‑36 (MQ=255) atCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctac < 1:163460‑M2/101‑36 (MQ=255) atCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctac > 2:1002511‑M2/1‑66 (MQ=255) cTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgt > 1:164065‑M2/1‑64 (MQ=255) ggAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtag < 1:1715780‑M2/101‑40 (MQ=255) gAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacggcttatccggcctacgtaga < 1:772656‑M2/101‑41 (MQ=255) gAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtaga > 1:255680‑M2/1‑61 (MQ=255) gcagcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtagagc > 1:1475200‑M2/1‑59 (MQ=255) gcagcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtagagc > 2:576650‑M2/1‑59 (MQ=255) agcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTAtgccggatgcggcgtgaacgccttatccggcctacgtagagcac < 1:986543‑M2/101‑45 (MQ=255) | ATTGCCAGCACACAACCGGCACAAACCACCGTATATCTGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 174/7367‑7466 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |