| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 103853 | 129 (1.910) | 32 (0.560) | 22/174 | 2.1 | 36.3% | intergenic (–/–) | –/– | –/– |
| ? | 98 | 14 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
AACTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGATAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/103741‑103853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCG > 98/14‑110 AACTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAG < 2:513353/101‑1AACTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAG < 1:98657/101‑1AACTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAG < 1:1235299/101‑1 ACTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGG < 1:917976/101‑1 CTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGC > 2:1218859/1‑101 TCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCC > 1:674035/1‑101 CTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCT < 2:1709136/101‑1 CAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGAT < 2:345504/101‑1 AGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGATA > 1:651237/1‑101 GATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGATAA > 1:345438/1‑101 ATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGATAAG > 1:472928/1‑101 TTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGATAAGC > 1:509955/1‑101 ccgGATGCGGCGTGAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTT < 2:526040/98‑1 GATGCGGCGTGAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTG < 2:645767/101‑1 GGCGTGAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTT < 2:607249/101‑1 CGTTAACGCCTCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGC < 2:579034/101‑1 CGTGAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGC < 1:53665/101‑1 gtgAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCC > 2:1557870/4‑101 gtgAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCC > 2:443396/4‑101 tgAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCA > 1:1221606/3‑101 gAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAG < 1:1605306/100‑1 ACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCA > 2:1645666/1‑101 CGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCAC < 1:817195/101‑1 CTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTT > 1:179778/1‑101 TATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTA > 2:461680/1‑101 TATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTA > 1:438807/1‑101 TCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAT < 2:998775/101‑1 TCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAT < 1:1043874/101‑1 TCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAT < 2:1524247/101‑1 TCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAT > 1:1030487/1‑101 CCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATA > 1:1053732/1‑101 CGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATAC < 2:728041/101‑1 CGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATAC > 1:796150/1‑101 GGCCTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACC > 1:463599/1‑101 CTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGG > 2:405673/1‑101 CTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGG > 1:992669/1‑101 CTACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGG < 2:992972/101‑1 TACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGC > 1:1671595/1‑101 ACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCTTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCT > 2:87431/1‑101 ACAAGATCGTGCAAATTCAATATATTGCA‑‑TGAGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCT > 2:944345/1‑101 GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCG < 2:1678819/101‑1 GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCG < 2:1030482/101‑1 TAGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGG > 2:1086034/1‑101 AGGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTTCTCTTCTGTCGTTTGCGGT < 2:1162097/101‑1 CTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCA < 1:956722/101‑1 GATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACG > 1:225079/1‑101 AGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCG > 2:195916/1‑101 AGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCG < 2:1188228/101‑1 AACTCTACAGATTACTCATCGTTTCATGCCAGATGCGGCGTAAACGCCTTATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCAACTCACCCA‑GTAGGCCTGATAAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > 1/103741‑103853‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCG > 98/14‑110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |