| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | 1 | = 103853 | 129 (1.910) | 32 (0.560) | 22/174 | 2.1 | 36.3% | intergenic (–/–) | –/– | –/– |
| ? | 98 | 14 = | 0 (0.000) | intergenic (–/–) | –/– | –/– | |||||
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCG > 98/1‑110 | ccggatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGtt < 2:526040‑M2/17‑1 (MQ=255) gatgcggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTg < 2:645767‑M2/20‑1 (MQ=255) ggcgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGttt < 2:607249‑M2/25‑1 (MQ=255) cgttaacgcctcatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGc < 2:579034‑M2/27‑1 (MQ=255) cgtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGc < 1:53665‑M2/27‑1 (MQ=255) gtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGcc > 2:443396‑M2/74‑101 (MQ=255) gtgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGcc > 2:1557870‑M2/74‑101 (MQ=255) tgaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCa > 1:1221606‑M2/73‑101 (MQ=255) gaacgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAg < 1:1605306‑M2/30‑1 (MQ=255) acgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCa > 2:1645666‑M2/70‑101 (MQ=255) cgccttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCAc < 1:817195‑M2/33‑1 (MQ=255) cttatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACttt > 1:179778‑M2/66‑101 (MQ=255) tatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTa > 1:438807‑M2/64‑101 (MQ=255) tatccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTa > 2:461680‑M2/64‑101 (MQ=255) tccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAt < 2:998775‑M2/40‑1 (MQ=255) tccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAt < 1:1043874‑M2/40‑1 (MQ=255) tccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAt < 2:1524247‑M2/40‑1 (MQ=255) tccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAAt > 1:1030487‑M2/62‑101 (MQ=255) ccggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATa > 1:1053732‑M2/61‑101 (MQ=255) cggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATAc < 2:728041‑M2/42‑1 (MQ=255) cggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATAc > 1:796150‑M2/60‑101 (MQ=255) ggcctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATAcc > 1:463599‑M2/59‑101 (MQ=255) ctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAgg > 2:405673‑M2/56‑101 (MQ=255) ctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAgg > 1:992669‑M2/56‑101 (MQ=255) ctacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAgg < 2:992972‑M2/46‑1 (MQ=255) tacaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGc > 1:1671595‑M2/55‑101 (MQ=255) acaagatcgtgcaaattcaatatattgcatgagccacgtaggcttgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCt > 2:87431‑M2/54‑101 (MQ=255) acaagatcgtgcaaattcaatatattgcatgagccacgtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCt > 2:944345‑M2/54‑101 (MQ=255) gagccacgtaggCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTc > 2:6795/11‑101 (MQ=255) gccacgtaggCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGt < 1:1627718/93‑1 (MQ=255) cacgtaggCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGttt < 1:443401/95‑1 (MQ=255) cgtaggCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGc < 1:1557876/97‑1 (MQ=255) gtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCg < 2:1678819‑M2/85‑1 (MQ=255) gtaggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCg < 2:1030482‑M2/85‑1 (MQ=255) taggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCgg > 2:1086034‑M2/16‑101 (MQ=255) aggcctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTTCTCTTCTGTCGTTTGCGGt < 2:1162097‑M2/87‑1 (MQ=255) ctgataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCa < 1:956722‑M2/91‑1 (MQ=255) gataagcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACg > 1:225079‑M2/9‑101 (MQ=255) agcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCg < 2:1188228‑M2/97‑1 (MQ=255) agcgTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCg > 2:195916‑M2/5‑101 (MQ=255) | ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCCTGATAAGCGTAGCGCATCAGGCAGTTTTGCGTTTGCCAGCACTTTTAATACCAGGCTTAAACCTGGCATTGAGATTACTCTTCTGTCGTTTGCGGTGGCACGCCCG > 98/1‑110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |